Tools and Data related to Enzymatic Methylation Sequencing
☆34Apr 2, 2026Updated last week
Alternatives and similar repositories for EM-seq
Users that are interested in EM-seq are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A flexible framework for nucleosome profiling of cell-free DNA☆29Jul 27, 2023Updated 2 years ago
- R package for Methylation-based Inference of Regulatory Activity☆13Apr 9, 2020Updated 6 years ago
- Pipeline for Cut&Tag analysis☆25Apr 15, 2025Updated 11 months ago
- A (mostly) universal methylation extractor for BS-seq experiments.☆178Jun 21, 2024Updated last year
- Tools for analyzing DNA methylation data☆44Feb 15, 2026Updated last month
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Bioconductor package for analysis of methylation data from Illumina's Infinium HumanMethylation arrays.☆15Mar 3, 2025Updated last year
- R package to work with ctDNA sequencing data☆47Feb 20, 2022Updated 4 years ago
- 🔬 R package: Analysis of Large Affymetrix Microarray Data Sets☆12Dec 14, 2025Updated 3 months ago
- Code repository for TCAT analyses☆13Sep 26, 2025Updated 6 months ago
- Open-source testing platform where AI agents navigate your app end-to-end and catch regressions on every PR. No test code required.☆58Apr 3, 2026Updated last week
- bisulfite sequencing pipeline from fastq to methylation reports☆13Nov 9, 2025Updated 5 months ago
- QC report generator for Hi-C pairs file☆13Sep 14, 2020Updated 5 years ago
- ☆13Jan 18, 2017Updated 9 years ago
- Python playground for cell-type-specific biology☆12Updated this week
- DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Runs a combination of tools to generate structural variant calls on whole-genome sequencing data☆49Jun 2, 2020Updated 5 years ago
- A Bioconductor package and shiny app for DNA methylation data length bias adjustment in gene set testing☆13May 8, 2021Updated 4 years ago
- Read level DNA methylation analysis of bisulfite converted sequencing data☆19Feb 23, 2026Updated last month
- ☆16Updated this week
- code for 'Cell Types of Origin of the Cell Free Transcriptome' by Vorperian et al☆17Feb 22, 2022Updated 4 years ago
- Scripts for analyses in the Griffin manuscript☆12Dec 14, 2022Updated 3 years ago
- cfDNA analysis workflow☆23Jun 15, 2023Updated 2 years ago
- A utility for splitting mixed origin NGS reads☆10Jun 1, 2021Updated 4 years ago
- BISulfite-seq CUI Toolkit☆26Feb 17, 2026Updated last month
- NordVPN Special Discount Offer • AdSave on top-rated NordVPN 1 or 2-year plans with secure browsing, privacy protection, and support for for all major platforms.
- Fast python code to merge paired-end reads☆13Oct 29, 2021Updated 4 years ago
- Links to data science, bioinformatics, statistics, and machine learning resources☆18Aug 20, 2020Updated 5 years ago
- Structural Variation and fusion detection using targeted sequencing data from circulating cell free DNA☆29Jun 6, 2024Updated last year
- A server for maintaining high-throughput sequencing QC data☆13Aug 5, 2025Updated 8 months ago
- cfDNApipe: A comprehensive quality control and analysis pipeline for cell-free DNA high-throughput sequencing data☆78Aug 18, 2022Updated 3 years ago
- ☆25Jan 18, 2022Updated 4 years ago
- Cell-Centric View of Tissue Transcriptome Measuring Cellular Compositions of Immune Microenvironment From Mouse RNA-Seq Data.☆27Nov 2, 2021Updated 4 years ago
- Individual level Differential Expression Analysis for Single cells☆26Dec 24, 2022Updated 3 years ago
- Chromatin contact paired-read single-cell Hi-C processing module for Nuc3D and NucTools☆15Sep 15, 2025Updated 6 months ago
- Wordpress hosting with auto-scaling on Cloudways • AdFully Managed hosting built for WordPress-powered businesses that need reliable, auto-scalable hosting. Cloudways SafeUpdates now available.
- Simple merge for ActiveRecord objects and their associations.☆23Mar 8, 2016Updated 10 years ago
- ☆76Jun 4, 2021Updated 4 years ago
- ☆11May 26, 2023Updated 2 years ago
- ☆12Apr 26, 2020Updated 5 years ago
- Microsatellite instability (MSI) detection for cfDNA samples.☆20Feb 20, 2021Updated 5 years ago
- CONICS: COpy-Number analysis In single-Cell RNA-Sequencing☆76Feb 27, 2023Updated 3 years ago
- Gossamer bioinformatics suite☆23Dec 4, 2024Updated last year