cfDNAPro specializes in standardized and robust cfDNA fragmentomic analysis
☆41Feb 14, 2026Updated last month
Alternatives and similar repositories for cfDNAPro
Users that are interested in cfDNAPro are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Code to reproduce "Detecting liver cancer using cell-free DNA fragmentomes☆11Nov 18, 2022Updated 3 years ago
- FinaleToolkit is a package and standalone program to extract fragmentation features of cell-free DNA from paired-end sequencing data.☆36Mar 9, 2026Updated last month
- Workflow for preprocessing cfDNA samples.☆12Nov 11, 2024Updated last year
- Collection of fragmentomic analysis scripts☆13Jul 3, 2024Updated last year
- Analysis of epigenetic signals captured by fragmentation patterns of cell-free DNA☆78Jul 22, 2020Updated 5 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Inferring expressed genes by whole-genome sequencing of plasma DNA☆19May 23, 2016Updated 9 years ago
- Important papers relating to the biology of cell free DNA☆19Sep 21, 2018Updated 7 years ago
- Scripts for analyses in the Griffin manuscript☆12Dec 14, 2022Updated 3 years ago
- A tool to detect tissue- and cancer- specific epigenetic signatures in WGS data of liquid biopsies☆10Mar 30, 2023Updated 3 years ago
- ☆76Jun 4, 2021Updated 4 years ago
- Main repository for Drews et al. (Nature, 2022)☆43Aug 14, 2023Updated 2 years ago
- Irons out wrinkles in noisy coverage data using robust PCA☆15May 14, 2025Updated 10 months ago
- R package to work with ctDNA sequencing data☆47Feb 20, 2022Updated 4 years ago
- cfDNApipe: A comprehensive quality control and analysis pipeline for cell-free DNA high-throughput sequencing data☆78Aug 18, 2022Updated 3 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- A flexible framework for nucleosome profiling of cell-free DNA☆29Jul 27, 2023Updated 2 years ago
- R package for CRAG☆12Feb 17, 2025Updated last year
- DNA copy number detection from off-target sequence data☆33May 17, 2018Updated 7 years ago
- Profiling of transcription factor binding sites in cell-free DNA☆27Apr 9, 2020Updated 6 years ago
- ☆31Mar 5, 2024Updated 2 years ago
- v2.x of the microassembly based somatic variant caller☆23Updated this week
- A tool to extract LOH blocks from VCF, BAM and FASTA data☆25Aug 30, 2024Updated last year
- Quantifying copy number signatures from absolute copy number profiles☆27Jul 23, 2025Updated 8 months ago
- Pipeline to produce consensus reads using unique molecular indexes/barcodes (UMIs)☆27Apr 2, 2026Updated last week
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- ☆11Jul 13, 2018Updated 7 years ago
- ☆27Feb 9, 2026Updated 2 months ago
- cfDNA cell type of origin estimation☆34Oct 19, 2023Updated 2 years ago
- ☆11Jun 14, 2023Updated 2 years ago
- cfDNA analysis workflow☆23Jun 15, 2023Updated 2 years ago
- ☆25Jan 18, 2022Updated 4 years ago
- Integrative analysis of complex structural variants☆22Sep 7, 2020Updated 5 years ago
- R tools for Agilent electrophoresis data☆48Jul 21, 2023Updated 2 years ago
- CNV detection tool for targeted NGS panel data☆16Feb 28, 2022Updated 4 years ago
- NordVPN Special Discount Offer • AdSave on top-rated NordVPN 1 or 2-year plans with secure browsing, privacy protection, and support for for all major platforms.
- ☆13Jan 18, 2017Updated 9 years ago
- R for Mass Spectrometry documentation☆15Nov 19, 2025Updated 4 months ago
- QDNAseq.hg38: QDNAseq bin annotation for the human genome build hg38☆17Dec 16, 2025Updated 3 months ago
- Bamgineer: Introduction of simulated allele-specific copy number variants into exome and targeted sequence data sets☆38Jul 30, 2020Updated 5 years ago
- Fork of the Polysolver project☆33Nov 21, 2019Updated 6 years ago
- A bioinformatics pipeline to phase and impute genetic data☆30Mar 31, 2026Updated last week
- Algorithm to implement Fraction and Allelic Copy number Estimate from Tumor/normal Sequencing using unmatched normal sample(s) for log ra…☆12Sep 15, 2023Updated 2 years ago