☆80Jun 4, 2021Updated 5 years ago
Alternatives and similar repositories for delfi_scripts
Users that are interested in delfi_scripts are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆33Mar 5, 2024Updated 2 years ago
- Code to reproduce "Detecting liver cancer using cell-free DNA fragmentomes☆11Nov 18, 2022Updated 3 years ago
- Analysis of epigenetic signals captured by fragmentation patterns of cell-free DNA☆80Jul 22, 2020Updated 6 years ago
- A flexible framework for nucleosome profiling of cell-free DNA☆32Jul 27, 2023Updated 3 years ago
- cfDNApipe: A comprehensive quality control and analysis pipeline for cell-free DNA high-throughput sequencing data☆82Aug 18, 2022Updated 4 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Estimating tumor fraction in cell-free DNA from ultra-low-pass whole genome sequencing.☆219Mar 20, 2024Updated 2 years ago
- R package to work with ctDNA sequencing data☆47Feb 20, 2022Updated 4 years ago
- Profiling of transcription factor binding sites in cell-free DNA☆27Apr 9, 2020Updated 6 years ago
- A tool to detect tissue- and cancer- specific epigenetic signatures in WGS data of liquid biopsies☆10Mar 30, 2023Updated 3 years ago
- ☆11Jun 14, 2023Updated 3 years ago
- R package for CRAG☆12Feb 17, 2025Updated last year
- ☆25Jan 18, 2022Updated 4 years ago
- cfDNA analysis workflow☆23Jun 15, 2023Updated 3 years ago
- Tools for extracting read counts and gc and mappability statistics in preparation for running HMMCopy.☆45Jul 28, 2021Updated 5 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- cfDNAPro specializes in standardized and robust cfDNA fragmentomic analysis☆45Jun 29, 2026Updated 3 months ago
- ☆59Mar 9, 2022Updated 4 years ago
- ☆10Nov 18, 2022Updated 3 years ago
- A mosaic detecting software based on phasing and random forest☆71Dec 8, 2025Updated 10 months ago
- ☆27Aug 8, 2024Updated 2 years ago
- High-intensity sequencing reveals the sources of plasma circulating cell-free DNA variants☆22Mar 27, 2020Updated 6 years ago
- Scripts for analyses in the Griffin manuscript☆13Dec 14, 2022Updated 3 years ago
- An et al. Nature Communications 2023☆15Jan 19, 2023Updated 3 years ago
- Irons out wrinkles in noisy coverage data using robust PCA☆15May 14, 2025Updated last year
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- cfDNA cell type of origin estimation☆36Oct 19, 2023Updated 2 years ago
- ☆22Jul 2, 2020Updated 6 years ago
- Analyses for Manuscript "Sensitive detection of renal cell carcinoma using plasma and urine cell-free DNA methylomes"☆13Aug 4, 2020Updated 6 years ago
- ☆13Jan 18, 2017Updated 9 years ago
- A Java package for non-invasive cancer diagnosis using methylation profiles of cell-Free DNA.☆17Apr 2, 2019Updated 7 years ago
- Msuite2: integrated DNA methylation data analysis toolkit with enhanced performance☆10Jan 21, 2025Updated last year
- ☆15Jun 27, 2025Updated last year
- Concordance and contamination estimator for tumor–normal pairs☆59Oct 22, 2024Updated last year
- ☆43Feb 9, 2024Updated 2 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Inferring expressed genes by whole-genome sequencing of plasma DNA☆20May 23, 2016Updated 10 years ago
- allele specific DNA methylation haplotype region☆13Oct 18, 2023Updated 2 years ago
- CNApp represents the first web tool to perform a comprehensive and integrative analysis of copy number alterations (CNAs) in a user-frien…☆21Jan 17, 2020Updated 6 years ago
- Tools and Data related to Enzymatic Methylation Sequencing☆36Updated this week
- This package contains a reference-based function to infer the proportions of a priori known cell subtypes present in a sample representin…☆57Mar 12, 2026Updated 7 months ago
- SiNVICT: Ultra-Sensitive Detection of Single Nucleotide Variants and Indels in Circulating Tumour DNA☆25Oct 6, 2020Updated 6 years ago
- ☆10Jul 13, 2022Updated 4 years ago