Jfortin1 / HiC_AB_CompartmentsLinks
☆13Updated 8 years ago
Alternatives and similar repositories for HiC_AB_Compartments
Users that are interested in HiC_AB_Compartments are comparing it to the libraries listed below
Sorting:
- A/B compartments for 12 cancer types estimated from TCGA methylation data☆20Updated 8 years ago
- ☆36Updated 2 years ago
- wg-blimp: an end-to-end analysis pipeline for whole genome bisulfite sequencing data☆28Updated 3 years ago
- ☆22Updated last month
- nanoNOMe (Nucleosome Occupancy and Methylome nanopore sequencing) Analysis☆18Updated 2 years ago
- Code to reproduce "Detecting liver cancer using cell-free DNA fragmentomes☆11Updated 2 years ago
- Python scripts for matching output of Pacific Biosciences IsoSeq RNA-seq pipeline to an annotation file.☆23Updated 9 years ago
- microRNA PREdiction From small RNA-seq data☆29Updated 7 years ago
- Example datasets for CNVkit (http://github.com/etal/cnvkit)☆23Updated 7 years ago
- CNV Rapid Aberration Detection And Reporting☆12Updated 4 years ago
- Long read to rMATS☆32Updated 2 years ago
- A software for calculating telomere length☆70Updated 6 years ago
- QC report generator for Hi-C pairs file☆12Updated 4 years ago
- Telomerecat: The telomere computational analysis tool☆21Updated 4 years ago
- Abismal is a mapper of FASTQ bisulfite-converted short reads (between 50 and 1000 bases) to a FASTA reference genome.☆18Updated 3 weeks ago
- Allo: a multi-mapped read rescue strategy for gene regulatory analyses☆24Updated 11 months ago
- Reproducibility workflow for Gigante et al., 2018: Using long-read sequencing to detect imprinted DNA methylation☆23Updated 6 years ago
- Toolkit for the design and analysis of amplicon sequencing experiments utilizing unique molecular identifiers (UMIs)☆42Updated last week
- ☆51Updated 6 years ago
- Identify and annotate TE-mediated insertions in long-read sequence data☆42Updated last month
- ☆36Updated 6 years ago
- ☆23Updated 8 months ago
- First version of PORE-cupine. Detecting SHAPE modification using direct RNA sequencing☆14Updated 2 years ago
- Seeking information like heteroplasmy, structure variants, etc. on Mitochondrial genome from next generation sequencing☆41Updated 6 years ago
- Long-read Isoform Quantification and Analysis☆38Updated 5 months ago
- GENome Organisation Visual Analytics☆16Updated 3 years ago
- Tools for processing and analyzing structural variants.☆33Updated 9 years ago
- BitMapperBS: a fast and accurate read aligner for whole-genome bisulfite sequencing☆30Updated 5 years ago
- Human pan-genome analysis pipeline☆30Updated 5 years ago
- TADtool is an interactive tool for the identification of meaningful parameters in TAD-calling algorithms for Hi-C data.☆48Updated 2 years ago