☆23Apr 29, 2026Updated 4 months ago
Alternatives and similar repositories for prokbert
Users that are interested in prokbert are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Pathogenfinder2☆19Apr 20, 2026Updated 5 months ago
- ☆10Jun 9, 2025Updated last year
- This is a deep learning method for identification of viral contigs with short length from metagenomic data.☆10Dec 20, 2021Updated 4 years ago
- Hierarchical binned indexed data store for on-disk genomic data.☆13Jan 18, 2025Updated last year
- snakemake-powered cli to download genomes using NCBI datasets☆15Aug 14, 2025Updated last year
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- a novel encoding method for viral identification in metagenomics☆15Sep 20, 2023Updated 3 years ago
- Meteor is a plateform for quantitative metagenomics profiling of complex ecosystems. Meteor relies on genes catalogue to perform species-…☆42Sep 16, 2026Updated last week
- ☆11Mar 11, 2025Updated last year
- Fast pairwise transmission inference from single genome and/or metagenomic data☆39Aug 21, 2026Updated last month
- ☆21Oct 27, 2023Updated 2 years ago
- ☆12Mar 29, 2025Updated last year
- Prediction of horizontal gene transfer (HGT) using graph convolutional network☆13Apr 25, 2022Updated 4 years ago
- ☆20Oct 18, 2024Updated last year
- ANNOgesic - A Swiss army knife for the RNA-Seq based annotation of bacterial/archaeal genomes☆34Feb 16, 2024Updated 2 years ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- Lemur is a tool for rapid and accurate taxonomic profiling on long-read metagenomic datasets☆25Apr 30, 2026Updated 4 months ago
- Predict prokaryotic hosts for phage (meta) genomic sequences☆11Apr 4, 2022Updated 4 years ago
- k-mer-based non-Bayesian Taxonomic Classifier☆20May 28, 2026Updated 3 months ago
- ☆13Jun 4, 2023Updated 3 years ago
- Evodictor is a software package for learning patterns and predicting the future of evolution by gain/losses of given traits☆14Sep 27, 2024Updated last year
- Methods to determine sequence element (unitig) presence/absence☆28Mar 6, 2026Updated 6 months ago
- fast, multithreaded sourmash operations: search, compare, and gather.☆26Updated this week
- Host prediction for phages☆29Nov 6, 2024Updated last year
- BertSNR: an interpretable deep learning framework for single nucleotide resolution identification of transcription factor binding sites b…☆13May 27, 2025Updated last year
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- HOTSPOT is a hierarchical host prediction tool for plasmid contigs using Transformer.