Alternatives and similar repositories for orfipy

Users that are interested in orfipy are comparing it to the libraries listed below

• shenwei356 / perfect-bioinformatic-tools
  What should perfect bioinformatic tools be like?
  ☆146Updated 3 months ago
• EBI-Metagenomics / genomes-catalogue-pipeline
  MGnify genome analysis pipeline
  ☆108Updated last month
• DessimozLab / read2tree
  a tool for inferring species tree from sequencing reads
  ☆156Updated 2 months ago
• hzi-bifo / RiboDetector
  Accurate and rapid RiboRNA sequences Detector based on deep learning
  ☆119Updated 2 months ago
• louiejtaylor / grabseqs
  A utility for easy downloading of reads from next-gen sequencing repositories like NCBI SRA
  ☆109Updated 5 months ago
• KatyBrown / CIAlign
  ☆133Updated last year
• steineggerlab / Metabuli
  Metabuli: specific and sensitive metagenomic classification via joint analysis of DNA and amino acid.
  ☆162Updated last month
• art-egorov / lovis4u
  Bioinformatics tool for Locus Visualisation
  ☆159Updated 2 weeks ago
• iquasere / KEGGCharter
  A tool for representing genomic potential and transcriptomic expression into KEGG pathways
  ☆61Updated last year
• EddyRivasLab / infernal
  RNA secondary structure/sequence profiles for homology search and alignment
  ☆123Updated last month
• broadinstitute / catch
  A package for designing compact and comprehensive capture probe sets.
  ☆94Updated 2 years ago
• hoelzer-lab / rnaflow
  A simple RNA-Seq differential gene expression pipeline using Nextflow
  ☆101Updated 6 months ago
• gamcil / cblaster
  Find clustered hits from a BLAST search
  ☆132Updated 3 weeks ago
• kblin / ncbi-acc-download
  Download files from NCBI Entrez by accession
  ☆134Updated last year
• giesselmann / nanopype
  Snakemake pipelines for nanopore sequencing data archiving and processing
  ☆91Updated 4 years ago
• BenLangmead / aws-indexes
  Catalog of genomic indexes freely available from public clouds
  ☆67Updated 2 weeks ago
• medema-group / BiG-SCAPE
  Similarity networks of biosynthetic gene clusters
  ☆152Updated last week
• HadrienG / tutorials
  Various bioinformatics tutorials
  ☆62Updated 2 years ago
• CompSynBioLab-KoreaUniv / FunGAP
  FunGAP: fungal Genome Annotation Pipeline
  ☆111Updated 8 months ago
• enasequence / enaBrowserTools
  A collection of scripts to assist in the retrieval of data from the ENA Browser
  ☆93Updated 6 months ago
• soedinglab / plass
  sensitive and precise assembly of short sequencing reads
  ☆162Updated last year
• gem-pasteur / macsyfinder
  MacSyFinder - Detection of macromolecular systems in protein datasets using systems modelling and similarity search.
  ☆72Updated last month
• glarue / jgi-query
  A simple command-line tool to download data from Joint Genome Institute databases
  ☆51Updated 3 years ago
• Juke34 / awesome-awesomeness-bioinformatics
  A list of awesome awesomeness related to bioinformatics and associated fields
  ☆42Updated 2 weeks ago
• WGLab / NanoCaller
  Variant calling tool for long-read sequencing data
  ☆117Updated 10 months ago
• novoalab / EpiNano
  Detection of RNA modifications from Oxford Nanopore direct RNA sequencing reads (Liu*, Begik* et al., Nature Comm 2019)
  ☆118Updated 7 months ago
• guyleonard / get_jgi_genomes
  A quick and easy way to download the genomes/predicted proteins of taxa available in JGI's Genome Portal.
  ☆38Updated 8 months ago
• AstrobioMike / bit
  Bioinformatics Tools
  ☆90Updated this week
• TongZhou2017 / modtector
  A high-performance modification detection tool in Rust
  ☆62Updated this week
• IndexThePlanet / Logan
  Logan Unitigs and Contigs
  ☆184Updated 4 months ago