☆27May 29, 2023Updated 3 years ago
Alternatives and similar repositories for AI-TAC
Users that are interested in AI-TAC are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Repository for modeling PRO-cap data with the BPNet-like model, ProCapNet.☆22Aug 28, 2025Updated 11 months ago
- ☆14Sep 1, 2024Updated last year
- In-silico Saturation Mutagenesis implementation with 10x or more speedup for certain architectures.☆23Jun 18, 2022Updated 4 years ago
- A method to rapidly assess cell type identity using both functional and random gene sets☆15May 2, 2019Updated 7 years ago
- python based queries for the proteomesoflife neo4j network database☆14Jun 17, 2020Updated 6 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- ☆14Jul 1, 2025Updated last year
- Analysis repository for "Droplet-based combinatorial indexing for massive scale single-cell epigenomics"☆11Sep 30, 2019Updated 6 years ago
- Transcriptional regulatory network inference from gene expression and prior information with LASSO-StARS☆15May 3, 2022Updated 4 years ago
- Deep learning model to predict degron sequences☆19Feb 24, 2023Updated 3 years ago
- ☆15Nov 9, 2018Updated 7 years ago
- Standard set of data-loaders for training and making predictions for DNA sequence-based models.☆84Sep 3, 2024Updated last year
- Predicting gene expression levels from genomic sequences☆55Jun 24, 2020Updated 6 years ago
- Bioinformatic approach to identify functional transcription factor binding motifs☆11May 16, 2022Updated 4 years ago
- ☆19Oct 21, 2024Updated last year
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Toolkit to train base-resolution deep neural networks on functional genomics data and to interpret them☆182Mar 19, 2026Updated 5 months ago
- PyTorch implementation of Basenji2.☆22Apr 29, 2025Updated last year
- Computational biology utility scripts☆19Apr 16, 2025Updated last year
- Map single-cell transcriptomes to copy number evolutionary trees.☆14Aug 18, 2024Updated 2 years ago
- ☆34Oct 27, 2021Updated 4 years ago
- Evaluating genomic sequence models for explaining personalized expression variation☆20Dec 6, 2023Updated 2 years ago
- ExplaiNN: interpretable and transparent neural networks for genomics☆48Apr 1, 2025Updated last year
- TF MOtif Discovery from Importance SCOres☆188Aug 10, 2026Updated last week
- Codebase for the domain adaptation (cross-species TF binding prediction) project.☆12Aug 29, 2022Updated 3 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Predicting transcription factor binding in single cells through deep learning☆14Oct 14, 2022Updated 3 years ago
- "DeepDiff: Deep-learning for predicting Differential gene expression from histone modifications", Bioinformatics, Volume 34, Issue 17,☆21Dec 10, 2019Updated 6 years ago
- An end-to-end computational pipeline for large Perturb-seq screens☆16Jul 27, 2026Updated 3 weeks ago
- Analytical tools and pipelines for bulk and single cell epigenomic and human genetic data☆26Nov 17, 2020Updated 5 years ago
- deep learning toolkit (written on top of tensorflow) to streamline computational biology analysis☆22Feb 10, 2023Updated 3 years ago
- ☆12Feb 6, 2023Updated 3 years ago
- ☆13Jun 24, 2019Updated 7 years ago
- Scalable sequence-informed embedding of single-cell ATAC-seq data with CellSpace☆41Jan 11, 2025Updated last year
- Code for the paper "Integrating regulatory DNA sequence and gene expression to predict genome-wide chromatin accessibility across cellula…☆44Jun 9, 2021Updated 5 years ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- code repository for Lagattuta et al. "Repertoire analyses reveal T cell receptor sequence features that influence T cell fate." Nat. Imm.…☆14Jan 28, 2025Updated last year
- ☆14Mar 11, 2022Updated 4 years ago
- ☆15Jun 4, 2023Updated 3 years ago
- Cherimoya is a lightweight sequence-to-function (S2F) model that is small, fast, and easy to use. Now usable by agents.☆53Updated this week
- An R package for feature selection in topological spaces.☆11Aug 12, 2021Updated 5 years ago
- ☆33Dec 2, 2022Updated 3 years ago
- Kinship In Mixed Model Analysis of RNA-seq☆16Apr 14, 2025Updated last year