Official implementation of μProtein -- Accelerating protein engineering with fitness landscape modeling and reinforcement learning
☆71Feb 20, 2026Updated last month
Alternatives and similar repositories for Mu-Protein
Users that are interested in Mu-Protein are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- TOKEN-IMPORTANCE GUIDED DIRECT PREFERENCE OPTIMIZATION☆25Jan 26, 2026Updated 2 months ago
- ☆24May 19, 2025Updated 10 months ago
- All-atom inverse protein folding through discrete flow matching (ICML2025)☆24Mar 22, 2026Updated 2 weeks ago
- a lightweight distogram-prediction model trained via contrastive learning☆14Dec 26, 2025Updated 3 months ago
- Utility scripts to generate and evaluate parametrically guided beta barrel protein backbone structures.☆14Nov 14, 2025Updated 4 months ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- ProteinDesign with RFdiffusion and ProteinMPNN/LigandMPNN☆23Mar 6, 2025Updated last year
- The python code for paper "Multi-objective Deep Reinforcement Learning for Mobile Edge Computing"☆124Jul 4, 2023Updated 2 years ago
- LatentDE: Latent-based Directed Evolution for Protein Sequence Design☆38Apr 2, 2025Updated last year
- The official code for PDVN: Retrosynthetic Planning with Dual Value Networks (ICML 2023)☆32Apr 21, 2024Updated last year
- A geometric foundation model for enzyme retrieval with evolutionary insights.☆82Mar 24, 2026Updated 2 weeks ago
- code for SeqDance/ESMDance, biophysics-informed protein language models☆57Jan 28, 2026Updated 2 months ago
- QuickProt: A Fast and Accurate Homology-Based Protein Annotation Tool for Non-Model Organisms to Advance Comparative Genomics☆18Jan 12, 2026Updated 2 months ago
- Command line interface for MDAnalysis☆23Apr 1, 2026Updated last week
- ☆16Mar 28, 2025Updated last year
- DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Implementation of Evolutionary and Metropolis Hastings Monte Carlo for text based (e.g. nucleotide/peptide) sequences☆13Mar 7, 2024Updated 2 years ago
- ☆13Sep 29, 2023Updated 2 years ago
- ☆20Feb 26, 2021Updated 5 years ago
- Code for the paper "Learning to engineer protein flexibility".☆23Mar 24, 2026Updated 2 weeks ago
- Official code repository for the paper "ProteinNPT: Improving Protein Property Prediction and Design with Non-Parametric Transformers"☆128Nov 19, 2025Updated 4 months ago
- A standardized protein design benchmark for motif-scaffolding problems☆78Jan 27, 2026Updated 2 months ago
- ☆23Jun 10, 2025Updated 10 months ago
- CARE: a Benchmark Suite for the Classification and Retrieval of Enzymes☆43Jun 17, 2025Updated 9 months ago
- Deep generative modeling of protein structural ensembles☆37Sep 22, 2025Updated 6 months ago
- NordVPN Special Discount Offer • AdSave on top-rated NordVPN 1 or 2-year plans with secure browsing, privacy protection, and support for for all major platforms.
- Graphical Representation of Ancestral Sequence Predictions☆12Mar 6, 2023Updated 3 years ago
- OVO, an open-source ecosystem for de novo protein design☆124Updated this week
- Reads data files acquired by MALDI-TOF MS on Bruker Daltonics machines of the *flex series☆14Oct 17, 2025Updated 5 months ago
- ☆17Jun 3, 2024Updated last year
- Diffusion-based all-atom protein generative model.☆233Aug 27, 2025Updated 7 months ago
- ☆68Apr 8, 2025Updated last year
- simple demo codes for Learning to Teach with Dynamic Loss Functions☆17Oct 22, 2019Updated 6 years ago
- PLACER is graph neural network for local prediction of protein-ligand conformational ensembles.☆235Nov 5, 2025Updated 5 months ago
- Graph neural network for generating novel amino acid sequences that fold into proteins with predetermined topologies.☆60Mar 24, 2021Updated 5 years ago
- NordVPN Special Discount Offer • AdSave on top-rated NordVPN 1 or 2-year plans with secure browsing, privacy protection, and support for for all major platforms.
- The official GitHub repository for the Nature Communications paper "Computational Design of Generalist Cyclopropanases with Stereodiverge…☆13Jan 23, 2026Updated 2 months ago
- Enzyme Activity Prediction of Sequence Variants onNovel Substrates using Improved Substrate Encodings and Convolutional Pooling☆18Nov 28, 2022Updated 3 years ago
- Consolidated repository to perform RLXF☆40Mar 12, 2026Updated 3 weeks ago
- Tailoring Molecules for Protein Pockets: a Transformer-based Generative Solution for Structured-based Drug Design☆20Jul 26, 2023Updated 2 years ago
- Python implementation of 3D Zernike moments with NumPy☆17Sep 28, 2024Updated last year
- Some scoring functions for predicting the effects of mutations on protein sequences using ESM-2☆11Dec 10, 2023Updated 2 years ago
- Learning with uncertainty for biological discovery and design☆34Mar 24, 2023Updated 3 years ago