anirudhvenk / antibody-dpoView external linksLinks
☆25May 19, 2025Updated 8 months ago
Alternatives and similar repositories for antibody-dpo
Users that are interested in antibody-dpo are comparing it to the libraries listed below
Sorting:
- ☆15Mar 28, 2025Updated 10 months ago
- ☆20Aug 25, 2025Updated 5 months ago
- Code for humanization of antibody and nanobody☆74Aug 28, 2025Updated 5 months ago
- Molecular dynamics without molecules: searching the conformational space of proteins with generative neural networks☆11Jun 13, 2022Updated 3 years ago
- Versatile human antibody sequence design☆21May 27, 2025Updated 8 months ago
- Codebase of paper "Structure Language Models for Protein Conformation Generation" (ICLR'25)☆74Feb 24, 2025Updated 11 months ago
- Deep reinforcement learning for protein complex modeling☆11May 28, 2022Updated 3 years ago
- ☆31Aug 16, 2025Updated 6 months ago
- Input files and binding free energy values from our benchmark with QuantumBind-RBFE☆16Apr 16, 2025Updated 10 months ago
- Computationally Restoring the Potency of a Clinical Antibody☆19Mar 1, 2024Updated last year
- ☆20Oct 4, 2022Updated 3 years ago
- A foundation model approach to guide antimicrobial peptide design in the era of artificial intelligence driven scientific discovery☆49Sep 1, 2025Updated 5 months ago
- ProteinDesign with RFdiffusion and ProteinMPNN/LigandMPNN☆22Mar 6, 2025Updated 11 months ago
- An Interface-Predicting Language Model for Designing Peptide-Guided Protein Degraders☆17Sep 10, 2024Updated last year
- PPI version of Pythia☆26Sep 12, 2025Updated 5 months ago
- Results and data from the pilot round of the Protein Engineering Tournament☆30Mar 25, 2025Updated 10 months ago
- Controlling the usage of hydrophobic residues on AfDesign for binder peptide design with AlphaFold hallucination protocol☆33Aug 10, 2023Updated 2 years ago
- A bundle of deep-learning packages for biomolecular structure prediction and design contributed to the Rosetta Commons☆38Oct 12, 2022Updated 3 years ago
- ParaAntiProt: Paratope Prediction Using Antibody and Protein Language Models☆10Jul 16, 2024Updated last year
- A conditionally adapted protein language model for the generation of enzymes☆23Nov 26, 2024Updated last year
- ☆118Jan 3, 2026Updated last month
- Some scripts that I keep using over and over.☆21Jul 5, 2025Updated 7 months ago
- Code for the paper "Learning to engineer protein flexibility".☆22Jan 21, 2026Updated 3 weeks ago
- Pretrainable geometric graph neural network for antibody affinity maturation☆72Mar 18, 2025Updated 11 months ago
- ☆16May 15, 2025Updated 9 months ago
- Improved antibody structure-based design using inverse folding☆152Dec 9, 2025Updated 2 months ago
- P450Diffusion: A tool for designing P450 sequences based on diffusion model☆26Jul 16, 2024Updated last year
- Multi-target de novo molecular generator conditioned on AlphaFold's latent protein embeddings.☆73Mar 27, 2025Updated 10 months ago
- Flexible Protein-Protein Docking with a Multi-Track Iterative Transformer.☆98Jul 29, 2024Updated last year
- ☆23Nov 6, 2024Updated last year
- HalluDesign, a hallucination-driven all-atom framework for the iterative co-optimization and co-design of protein sequences and structure…☆62Feb 3, 2026Updated 2 weeks ago
- ☆28Dec 6, 2022Updated 3 years ago
- ☆23Jul 4, 2021Updated 4 years ago
- Conditioning diffusion models for scaffolding protein motifs. A repository for my master's dissertation.☆12Dec 10, 2024Updated last year
- Accurate prediction of drug–target interactions in drug discovery.☆10Dec 9, 2025Updated 2 months ago
- ☆25Oct 8, 2024Updated last year
- This is the official repository of paper - GeoAB: Towards Realistic Antibody Design and Reliable Affinity Maturation (ICML2024)☆42Jun 17, 2024Updated last year
- Deep learning framework for protein sequence design from a backbone scaffold that can leverage the molecular context including non-protei…☆47Nov 4, 2025Updated 3 months ago
- mirror of https://zhanglab.ccmb.med.umich.edu/EDTSurf/☆10Jun 20, 2023Updated 2 years ago