Alternatives and similar repositories for AlphaFold3-Conda-Install

Users that are interested in AlphaFold3-Conda-Install are comparing it to the libraries listed below

• liuyf020419 / SCUBA-D
  ☆61Updated last year
• Jfeldman34 / AF3Complex
  ☆53Updated 7 months ago
• SLx64 / af3cli
  A command-line interface and Python library for generating AlphaFold3 input files.
  ☆38Updated last month
• Wublab / Pythia
  Structure-based self-supervised learning enables ultrafast prediction of stability changes upon mutations
  ☆95Updated 2 months ago
• Kuhlman-Lab / evopro
  ☆94Updated 3 months ago
• bene837 / af2seq
  ☆47Updated last year
• patrickbryant1 / AFProfile
  Improved protein complex prediction with AlphaFold-multimer by denoising the MSA profile
  ☆72Updated last year
• Mingchenchen / AF3Score
  A Score-Only Adaptation of AlphaFold3 for Biomolecular Structure Evaluation
  ☆108Updated 2 weeks ago
• LBM-EPFL / CARBonAra
  Deep learning framework for protein sequence design from a backbone scaffold that can leverage the molecular context including non-protei…
  ☆47Updated 3 months ago
• tommyhuangthu / UniDesign
  Universal framework for physically based computational protein design
  ☆37Updated 2 years ago
• LongxingCao / pymol_scripts
  bakerlab pymol scripts
  ☆26Updated 6 years ago
• jsunn-y / ALDE
  Active Learning-Assisted Directed Evolution for Protein Engineering
  ☆78Updated 3 months ago
• CarbonMatrixLab / carbonnovo
  Official open-source of CarbonNovo: Joint Design of Protein Structure and Sequence Using a Unified Energy-based Model
  ☆25Updated last year
• huifengzhao / RAPiDock
  ☆77Updated 3 months ago
• meilerlab / HyperMPNN
  HyperMPNN ‒ A general strategy to design thermostable proteins learned from hyperthermophiles
  ☆70Updated 7 months ago
• data2code / afpdb
  Efficient manipulation of protein structures in Python
  ☆63Updated 4 months ago
• ShuklaGroup / esmdynamic
  ESMDynamic repo
  ☆22Updated 2 months ago
• gfzhou / OpenVS
  Codes and scripts for "An artificial intelligence accelerated virtual screening platform for drug discovery"
  ☆65Updated last year
• bzho3923 / ProtLGN
  ☆33Updated last year
• mabr3112 / riff_diff_protflow
  ProtFlow Implementation of the RiffDiff pipeline to design enzymes from theozymes.
  ☆80Updated 2 months ago
• ohuelab / Solubility_AfDesign
  Controlling the usage of hydrophobic residues on AfDesign for binder peptide design with AlphaFold hallucination protocol
  ☆33Updated 2 years ago
• samuelmurail / af_analysis
  Analysis of alphafold and colabfold results
  ☆34Updated last month
• ohuelab / ColabFold-cycpep-dock
  Making Protein folding accessible to all!
  ☆25Updated 2 years ago
• Bitbol-Lab / rag-esm
  RAG-ESM is a retrieval-augmented framework that allows to condition pretrained ESM2 protein language models on homologous sequences
  ☆27Updated 5 months ago
• petergroth / kermut
  This is the official code repository for the paper NeurIPS 2024 spotlight paper "Kermut: Composite kernel regression for protein variant …
  ☆42Updated 6 months ago
• KULL-Centre / _2024_cagiada_stability
  ☆74Updated 10 months ago
• ELELAB / RosettaDDGPrediction
  ☆84Updated 2 months ago
• ProteinDesignLab / protpardelle-1c
  Updated Protpardelle models with more robust motif scaffolding and multichain support
  ☆66Updated last month
• Kuhlman-Lab / ThermoMPNN-D
  Extension of ThermoMPNN for double mutant predictions
  ☆53Updated 4 months ago
• cytokineking / FreeBindCraft
  BindCraft modified to make PyRosetta use and installation optional: no license needed
  ☆119Updated 2 months ago