A geometric foundation model for enzyme retrieval with evolutionary insights.
☆103Oct 19, 2026Updated 2 weeks ago
Alternatives and similar repositories for EnzymeCAGE
Users that are interested in EnzymeCAGE are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Official repository of GENzyme☆66Nov 29, 2024Updated last year
- Official repository of EnzymeFlow☆102Dec 7, 2024Updated last year
- Reaction-Conditioned Virtual Screening of Enzymes☆50Jun 13, 2026Updated 4 months ago
- The codebase for EnzyGen2☆32Apr 20, 2026Updated 6 months ago
- ML-optimized library design with improved fitness and diversity for protein engineering☆37Nov 5, 2025Updated 11 months ago
- End-to-end encrypted email - Proton Mail • AdSpecial offer: 40% Off Yearly / 80% Off First Month. All Proton services are open source and independently audited for security.
- a python package to analyze short molecular dynamics simulations for the effect of point mutations on stability☆14Aug 18, 2026Updated 2 months ago
- Structure-based self-supervised learning enables ultrafast prediction of stability changes upon mutations☆119Apr 15, 2026Updated 6 months ago
- ☆33Dec 12, 2024Updated last year
- Enzyme kinetics data extraction pipeline☆18Sep 7, 2026Updated last month
- ☆36Oct 10, 2025Updated last year
- P450Diffusion: A tool for designing P450 sequences based on diffusion model☆27Apr 28, 2026Updated 6 months ago
- Machine Learning models for in vitro enzyme kinetic parameter prediction☆98Jun 15, 2026Updated 4 months ago
- ☆45Jun 12, 2025Updated last year
- ☆43Jun 17, 2025Updated last year
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- ☆11Sep 21, 2026Updated last month
- Sequence-Structure-Surface Model for Protein Fitness Prediction (S3F)☆55Dec 3, 2024Updated last year
- PLACER is graph neural network for local prediction of protein-ligand conformational ensembles.☆269Nov 5, 2025Updated 11 months ago
- CARE: a Benchmark Suite for the Classification and Retrieval of Enzymes☆49Jun 17, 2025Updated last year
- ☆23Jun 10, 2025Updated last year
- ProtFlow Implementation of the RiffDiff pipeline to design enzymes from theozymes.☆96Jul 31, 2026Updated 3 months ago
- ProteinDesign with RFdiffusion and ProteinMPNN/LigandMPNN☆27Mar 6, 2025Updated last year
- GNN trained to predict changes in thermodynamic stability for protein point mutants☆279Sep 9, 2026Updated last month
- The official code repository of "OmniESI: A unified framework for enzyme-substrate interaction prediction with progressive conditional de…☆34Aug 26, 2025Updated last year
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- ☆32Oct 26, 2026Updated last week
- ☆86Aug 26, 2025Updated last year
- Code of “Multi-Modal Deep Learning Enables Ultrafast and Accurate Annotation of Enzymatic Active Sites”☆61Jul 30, 2026Updated 3 months ago
- Inference code for RFdiffusion2☆454Oct 22, 2026Updated last week
- ☆84Sep 12, 2024Updated 2 years ago
- Official repository of ReactZyme☆47Oct 12, 2024Updated 2 years ago
- ☆646Feb 6, 2025Updated last year
- Code for GEMS☆10Apr 18, 2026Updated 6 months ago
- HyperMPNN ‒ A general strategy to design thermostable proteins learned from hyperthermophiles☆90Jul 2, 2025Updated last year
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- The metabolic twin model of yeast☆13Sep 11, 2025Updated last year
- ☆57Aug 13, 2025Updated last year
- MULTI-evolve: a machine learning-guided end-to-end framework for engineering hyperactive multi-mutant proteins☆82Feb 28, 2026Updated 8 months ago
- GRACE: Generative Renaissance in Artificial Computational Enzyme Design☆19Jan 8, 2025Updated last year
- ☆88Mar 23, 2026Updated 7 months ago
- A generalized enzyme kinetics parameter prediction model.☆98Oct 2, 2025Updated last year
- This is the offical codebase to reproduce and use EVOLVEpro, a model for in silico directed evolution of protein activities using few-sho…☆383Jun 11, 2025Updated last year