☆88Oct 6, 2022Updated 3 years ago
Alternatives and similar repositories for c_AMPs-prediction
Users that are interested in c_AMPs-prediction are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Attentive deep learning model for antimicrobial peptide prediction☆65Jun 2, 2026Updated 2 months ago
- Predict AMPs in (meta)genomes and peptides☆96Jul 19, 2026Updated 3 weeks ago
- Generator and regressor neural networks for antimicrobial peptides☆25Jan 30, 2024Updated 2 years ago
- Collecting AMP MIC data from different sources, then running a GAN to output promising sequences☆91Aug 2, 2024Updated 2 years ago
- ☆11Mar 11, 2025Updated last year
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- ☆15Jun 24, 2024Updated 2 years ago
- ☆24Feb 20, 2025Updated last year
- Machine Learning Designs Non-Hemolytic Antimicrobial Peptides☆37Mar 19, 2021Updated 5 years ago
- HydrAMP: a deep generative model for antimicrobial peptide discovery☆62Nov 26, 2024Updated last year
- ☆19Feb 25, 2026Updated 5 months ago
- A PyTorch implementation of "Automatic Identification and Virtual Directed Evolution of Antimicrobial Peptides with Explainable Deep Lear…☆44Aug 1, 2025Updated last year
- ☆18May 27, 2026Updated 2 months ago
- ☆35Jun 26, 2025Updated last year
- Scripts for calculating features and regression of prokaryote OGT☆25Feb 13, 2024Updated 2 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Fast and sensitive discovery of complete phages and prophages in bacterial genome sequences☆22Dec 16, 2024Updated last year
- ☆21Oct 4, 2023Updated 2 years ago
- ☆18Oct 16, 2025Updated 10 months ago
- ISCompare, an opensource program to identify Differentially Located Insertion Sequences☆14Apr 30, 2026Updated 3 months ago
- Altered version of PathoFact to work more conveniently with SLURM and large input files☆14Nov 7, 2024Updated last year
- The implementation of the paper sAMPpred-GAT: Prediction of Antimicrobial Peptide by Graph Attention Network and Predicted Peptide Struct…☆36Oct 1, 2022Updated 3 years ago
- detect temperate phage (active prophage) in assembled bacterial genome sequences☆15Feb 10, 2022Updated 4 years ago
- LLMs for high-throughput mining and generation of antimicrobial peptides☆27Oct 10, 2025Updated 10 months ago
- A foundation model approach to guide antimicrobial peptide design in the era of artificial intelligence driven scientific discovery☆57Sep 1, 2025Updated 11 months ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- ☆19Feb 3, 2023Updated 3 years ago
- ☆20Mar 29, 2022Updated 4 years ago
- source code for https://arxiv.org/abs/2005.11248 "Accelerating Antimicrobial Discovery with Controllable Deep Generative Models and Molec…☆109Sep 17, 2025Updated 10 months ago
- This is a comprehensive database for fast and accurately analyzing the phosphorus cycling genes.☆38Jul 12, 2022Updated 4 years ago
- A novel approach to the classification of antimicrobial peptides (AMPs) using pre-trained language models to create contextual vectorized…☆18Sep 10, 2024Updated last year
- A scalable high-throughput metabolic and biogeochemical functional trait profiler☆231Mar 24, 2026Updated 4 months ago
- A command line tool to identify and annotate small proteins in microbial sequencing datasets.☆27Mar 25, 2023Updated 3 years ago
- Antimicrobial Peptide Structural Evolution Miner (AMP-SEMiner), an integrated AI framework designed for the simultaneous identification o…☆15May 10, 2025Updated last year
- ☆19Sep 5, 2024Updated last year
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- ☆30Jan 21, 2024Updated 2 years ago
- The construction of reference gene catalog and metagenome-assembled genomes of pig gut microbiome.☆30Jul 21, 2022Updated 4 years ago
- ☆29Aug 29, 2024Updated last year
- ☆31Oct 26, 2021Updated 4 years ago
- ☆14Jul 12, 2021Updated 5 years ago
- BGC Detection and Classification Using Deep Learning☆160Nov 11, 2023Updated 2 years ago
- Personal branch of chemprop used to predict the antibiotics Abaucin☆29May 25, 2023Updated 3 years ago