Generator and regressor neural networks for antimicrobial peptides
☆25Jan 30, 2024Updated 2 years ago
Alternatives and similar repositories for Deep_AMP
Users that are interested in Deep_AMP are comparing it to the libraries listed below
Sorting:
- HydrAMP: a deep generative model for antimicrobial peptide discovery☆56Nov 26, 2024Updated last year
- Code for paper 'Accelerating Antimicrobial Peptide Discovery with Latent Sequence-Structure Model'☆12Mar 21, 2024Updated last year
- ☆18Oct 16, 2025Updated 4 months ago
- A novel approach to the classification of antimicrobial peptides (AMPs) using pre-trained language models to create contextual vectorized…☆17Sep 10, 2024Updated last year
- ☆15Jun 24, 2024Updated last year
- ☆17Feb 25, 2026Updated last week
- Attentive deep learning model for antimicrobial peptide prediction☆56Mar 22, 2025Updated 11 months ago
- ☆23Feb 20, 2025Updated last year
- Machine Learning Designs Non-Hemolytic Antimicrobial Peptides☆35Mar 19, 2021Updated 4 years ago
- This is a new deep-learning pipeline for AMP predictions☆16Mar 5, 2025Updated last year
- ☆90Oct 6, 2022Updated 3 years ago
- Personal branch of chemprop used to predict the antibiotics Abaucin☆29May 25, 2023Updated 2 years ago
- Antimicrobial Peptide Structural Evolution Miner (AMP-SEMiner), an integrated AI framework designed for the simultaneous identification o…☆13May 10, 2025Updated 9 months ago
- ☆11Apr 25, 2021Updated 4 years ago
- The code corresponding to Transfer Learning for a Foundational Chemistry Model☆12Dec 5, 2023Updated 2 years ago
- AMPDeep: Hemolytic Activity Prediction of Antimicrobial Peptides using Transfer Learning☆13Aug 15, 2022Updated 3 years ago
- A foundation model approach to guide antimicrobial peptide design in the era of artificial intelligence driven scientific discovery☆49Sep 1, 2025Updated 6 months ago
- Collecting AMP MIC data from different sources, then running a GAN to output promising sequences☆87Aug 2, 2024Updated last year
- source code for https://arxiv.org/abs/2005.11248 "Accelerating Antimicrobial Discovery with Controllable Deep Generative Models and Molec…☆110Sep 17, 2025Updated 5 months ago
- A PyTorch implementation of "Automatic Identification and Virtual Directed Evolution of Antimicrobial Peptides with Explainable Deep Lear…☆40Aug 1, 2025Updated 7 months ago
- ☆13Aug 18, 2023Updated 2 years ago
- An improved method for predicting toxicity of proteins☆18Aug 26, 2023Updated 2 years ago
- ☆15Sep 5, 2025Updated 6 months ago
- The GAN model for designing AMP☆16Aug 19, 2025Updated 6 months ago
- The implementation of the paper sAMPpred-GAT: Prediction of Antimicrobial Peptide by Graph Attention Network and Predicted Peptide Struct…☆35Oct 1, 2022Updated 3 years ago
- Workflow to download, process, and explore microbial RNA-seq data from NCBI SRA☆17Feb 29, 2024Updated 2 years ago
- ☆18Oct 4, 2023Updated 2 years ago
- ☆18Nov 30, 2025Updated 3 months ago
- This repo contains the collection of codes to find designer interfacial mutations☆17Sep 4, 2023Updated 2 years ago
- ☆23Feb 20, 2026Updated last week
- ☆19Jan 18, 2026Updated last month
- An Interface-Predicting Language Model for Designing Peptide-Guided Protein Degraders☆16Sep 10, 2024Updated last year
- Online tool for comparing prices and feasibility of DNA synthesis☆22Mar 2, 2023Updated 3 years ago
- ☆31Mar 20, 2025Updated 11 months ago
- Transformer Based Language Model for Peptide Property Prediction☆49Aug 2, 2024Updated last year
- Predict AMPs in (meta)genomes and peptides☆89Nov 24, 2025Updated 3 months ago
- Merging assemblies by using adjacency algebraic model and classification☆22Jun 17, 2023Updated 2 years ago
- Ancient microbiome snakemake workflow☆27Apr 11, 2025Updated 10 months ago
- ☆22Oct 11, 2021Updated 4 years ago