amirpandi / Deep_AMPLinks
Generator and regressor neural networks for antimicrobial peptides
☆25Updated last year
Alternatives and similar repositories for Deep_AMP
Users that are interested in Deep_AMP are comparing it to the libraries listed below
Sorting:
- ☆51Updated this week
- HydrAMP: a deep generative model for antimicrobial peptide discovery☆50Updated 8 months ago
- Rapid protein-protein interaction network creation from multiple sequence alignments with Deep Learning☆90Updated last year
- ☆20Updated 4 months ago
- scripts and facilities for in-silico mutagenesis with FoldX☆57Updated 3 weeks ago
- GTalign, high-performance protein structure alignment, superposition and search☆48Updated this week
- ☆30Updated last year
- A Memetic Algorithm boosts accuracy and speed of all-atom protein-protein docking☆29Updated last month
- Machine learning prediction of enzyme optimum pH☆44Updated 3 months ago
- Fast indexing and search of discontinuous motifs in protein structures☆62Updated last week
- PyDock Tutorial☆32Updated 7 years ago
- TemStaPro - a program for protein thermostability prediction using sequence representations from a protein language model.☆59Updated last year
- Fast and accurate protein domain segmentation using Invariant Point Attention☆40Updated 2 months ago
- ☆40Updated 11 months ago
- PyMOL extension to color AlphaFold structures by confidence (pLDDT).☆106Updated last year
- Detection of remote homology by comparison of protein language model representations☆54Updated 7 months ago
- PepFun 2.0: improved protocols for the analysis of natural and modified peptides☆24Updated 2 years ago
- ColabFold protocol☆52Updated 9 months ago
- ☆68Updated 10 months ago
- PLM based active learning model for protein engineering☆82Updated last year
- Machine learning prediction of enzyme optimum pH☆15Updated 3 months ago
- Graph Network for protein-protein interface including language model features☆32Updated last year
- Exploring the conformational ensembles of protein-protein complexes with transformer-based generative neural networks☆31Updated last year
- ☆31Updated 3 years ago
- A foundation model approach to guide antimicrobial peptide design in the era of artificial intelligence driven scientific discovery☆37Updated 3 weeks ago
- Active Learning-Assisted Directed Evolution for Protein Engineering☆63Updated 8 months ago
- A tool for accurate prediction of a protein's secondary structure from only it's amino acid sequence☆56Updated 4 months ago
- AlphaFill is an algorithm based on sequence and structure similarity that “transplants” missing compounds to the AlphaFold models. By add…☆101Updated 3 months ago
- Physicochemical properties, indices and descriptors for amino-acid sequences.☆99Updated 2 weeks ago
- AlphaFold-initiated replica exchange protein docking☆83Updated 2 months ago