jkwang93 / AMP-DesignerLinks
A foundation model approach to guide antimicrobial peptide design in the era of artificial intelligence driven scientific discovery
☆36Updated 2 months ago
Alternatives and similar repositories for AMP-Designer
Users that are interested in AMP-Designer are comparing it to the libraries listed below
Sorting:
- Structure-based self-supervised learning enables ultrafast prediction of stability changes upon mutations☆63Updated this week
- ☆81Updated last month
- A command-line interface and Python library for generating AlphaFold3 input files.☆35Updated last month
- ☆50Updated 3 months ago
- Zero-shot prediction of mutation effects on protein function with multimodal deep representation learning☆63Updated last year
- Active Learning-Assisted Directed Evolution for Protein Engineering☆61Updated 7 months ago
- Learning the language of protein-protein interactions☆80Updated last month
- ☆31Updated 3 weeks ago
- ☆60Updated last year
- Exploring the conformational ensembles of protein-protein complexes with transformer-based generative neural networks☆29Updated last year
- A generalized enzyme kinetics parameter prediction model.☆53Updated 2 weeks ago
- HyperMPNN ‒ A general strategy to design thermostable proteins learned from hyperthermophiles☆60Updated 2 weeks ago
- TemStaPro - a program for protein thermostability prediction using sequence representations from a protein language model.☆59Updated last year
- ☆73Updated 10 months ago
- Transformer Based Language Model for Peptide Property Prediction☆47Updated 11 months ago
- ☆69Updated 4 years ago
- ☆70Updated 4 months ago
- AlphaFold-initiated replica exchange protein docking☆83Updated last month
- Deep learning framework for protein sequence design from a backbone scaffold that can leverage the molecular context including non-protei…☆44Updated 7 months ago
- Analysis of alphafold and colabfold results☆30Updated last week
- Machine learning prediction of enzyme optimum pH☆44Updated 2 months ago
- Improved protein complex prediction with AlphaFold-multimer by denoising the MSA profile☆67Updated 10 months ago
- Fast and accurate protein domain segmentation using Invariant Point Attention☆40Updated last month
- ☆28Updated 5 months ago
- Computer aided proximal decaging as a universal strategy for temporal protein activation☆23Updated last month
- ☆31Updated 11 months ago
- ☆43Updated 10 months ago
- ML-optimized library design with improved fitness and diversity for protein engineering☆35Updated 11 months ago
- An accurate and efficient protein sequence design approach☆24Updated 4 months ago
- Physics-Guided All-Atom Diffusion Model for Accurate Protein-Ligand Complex Prediction☆64Updated 3 months ago