jkwang93 / AMP-DesignerLinks
A foundation model approach to guide antimicrobial peptide design in the era of artificial intelligence driven scientific discovery
☆43Updated 2 months ago
Alternatives and similar repositories for AMP-Designer
Users that are interested in AMP-Designer are comparing it to the libraries listed below
Sorting:
- code for IDR binding paper 2025☆59Updated 9 months ago
- Zero-shot prediction of mutation effects on protein function with multimodal deep representation learning☆67Updated 3 months ago
- Predicting high-fitness mutations based on protein inverse folding models☆66Updated last month
- Structure-based self-supervised learning enables ultrafast prediction of stability changes upon mutations☆80Updated 4 months ago
- A generalized enzyme kinetics parameter prediction model.☆71Updated last month
- Active Learning-Assisted Directed Evolution for Protein Engineering☆70Updated 3 weeks ago
- A command-line interface and Python library for generating AlphaFold3 input files.☆37Updated 5 months ago
- ☆54Updated 3 months ago
- ☆50Updated 4 months ago
- HyperMPNN ‒ A general strategy to design thermostable proteins learned from hyperthermophiles☆67Updated 4 months ago
- Machine learning prediction of enzyme optimum pH☆47Updated 6 months ago
- ☆62Updated last year
- ☆44Updated 3 months ago
- Fast deep learning methods for large-scale protein-protein interaction screening☆99Updated 3 months ago
- Exploring the conformational ensembles of protein-protein complexes with transformer-based generative neural networks☆32Updated last year
- Graphinity: Equivariant Graph Neural Network Architecture for Predicting Change in Antibody-Antigen Binding Affinity☆52Updated 4 months ago
- ☆74Updated last year
- Deep learning framework for protein sequence design from a backbone scaffold that can leverage the molecular context including non-protei…☆46Updated 2 weeks ago
- AlphaFold-initiated replica exchange protein docking☆84Updated 5 months ago
- PLM based active learning model for protein engineering☆84Updated last year
- ☆91Updated last month
- ☆73Updated 5 years ago
- ☆33Updated last year
- Fast and accurate protein domain segmentation using Invariant Point Attention☆42Updated 5 months ago
- Learning the language of protein-protein interactions☆103Updated last month
- ☆29Updated last month
- HydrAMP: a deep generative model for antimicrobial peptide discovery☆54Updated 11 months ago
- Transformer Based Language Model for Peptide Property Prediction☆48Updated last year
- Versatile Embedding Network for Understanding protein Sequences☆24Updated 6 months ago
- Improved protein complex prediction with AlphaFold-multimer by denoising the MSA profile☆70Updated last year