Machine Learning Designs Non-Hemolytic Antimicrobial Peptides
☆36Mar 19, 2021Updated 5 years ago
Alternatives and similar repositories for MLpeptide
Users that are interested in MLpeptide are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- AMPDeep: Hemolytic Activity Prediction of Antimicrobial Peptides using Transfer Learning☆12Aug 15, 2022Updated 4 years ago
- Collecting AMP MIC data from different sources, then running a GAN to output promising sequences☆90Aug 2, 2024Updated 2 years ago
- HydrAMP: a deep generative model for antimicrobial peptide discovery☆61Nov 26, 2024Updated last year
- ☆16Oct 16, 2025Updated last year
- Generator and regressor neural networks for antimicrobial peptides☆23Jan 30, 2024Updated 2 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Long short-term memory recurrent neural networks for learning peptide and protein sequences to later design new, similar examples.☆80Mar 25, 2023Updated 3 years ago
- source code for https://arxiv.org/abs/2005.11248 "Accelerating Antimicrobial Discovery with Controllable Deep Generative Models and Molec…☆106Sep 17, 2025Updated last year
- Code for paper 'Accelerating Antimicrobial Peptide Discovery with Latent Sequence-Structure Model'☆12Mar 21, 2024Updated 2 years ago
- The GAN model for designing AMP☆16Aug 19, 2025Updated last year
- ☆20Sep 5, 2024Updated 2 years ago
- ☆15Jun 18, 2024Updated 2 years ago
- This script makes a cyclic peptide or cyclic nucleotide topology file for GROMACS out of (specially prepared) linear molecule topology fi…☆14Nov 24, 2020Updated 5 years ago
- ☆89Oct 6, 2022Updated 4 years ago
- Peptide optimization with Machine Learning☆83Aug 21, 2026Updated 2 months ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- metallocage construction and binding affinity calculations☆18May 30, 2023Updated 3 years ago
- Python package for peptide sequence generation, peptide descriptor calculation and sequence analysis.☆66Sep 22, 2026Updated 3 weeks ago
- Diff-AMP: all-in-one antimicrobial peptide design with diffusion models and reinforcement learning: generation, identification, property …☆19Feb 25, 2026Updated 7 months ago
- A PyTorch implementation of "Automatic Identification and Virtual Directed Evolution of Antimicrobial Peptides with Explainable Deep Lear…☆45Aug 1, 2025Updated last year
- Another Molecular String Representation☆11Sep 30, 2026Updated 2 weeks ago
- Augmented Memory and Beam Enumeration implementation☆27Jun 9, 2024Updated 2 years ago
- A command line application to launch molecular dynamics simulations with OpenMM☆41Apr 7, 2022Updated 4 years ago
- Teaching Material☆15Oct 2, 2024Updated 2 years ago
- ☆39Aug 11, 2023Updated 3 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Code for memory-assisted reinforcement learning☆24Oct 19, 2020Updated 6 years ago
- ☆57Apr 26, 2019Updated 7 years ago
- Python script to visualize helical wheels based on input sequence.☆11Mar 27, 2019Updated 7 years ago
- Synthesis generative model☆49Apr 24, 2025Updated last year
- ☆10Sep 9, 2025Updated last year
- Machine learning exercises for the MolSim course (http://www.acmm.nl/molsim/molsim2023/index.html)☆30Jan 16, 2024Updated 2 years ago
- A deep learning framework for predicting interactions between protein-protein interaction targets and modulators☆16Dec 2, 2023Updated 2 years ago
- Code for paper "ToxIBTL: prediction of peptide toxicity based on information bottleneck and transfer learning"☆13Jan 24, 2022Updated 4 years ago
- ☆90Jan 29, 2022Updated 4 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- AnOxPePred: Using deep learning for the prediction of antioxidative properties of peptides.☆11Dec 28, 2019Updated 6 years ago
- A foundation model approach to guide antimicrobial peptide design in the era of artificial intelligence driven scientific discovery☆58Sep 1, 2025Updated last year
- Repository of Jupyter Notebooks on Colab, Binder and Huggingface for Bio, Chemistry and Physics☆13Jul 29, 2023Updated 3 years ago
- ☆19Jan 18, 2026Updated 9 months ago
- Guided Conditional Wasserstein GAN for De Novo Protein Design☆35Feb 23, 2021Updated 5 years ago
- The implementation of the paper sAMPpred-GAT: Prediction of Antimicrobial Peptide by Graph Attention Network and Predicted Peptide Struct…☆34Oct 1, 2022Updated 4 years ago
- ☆32Oct 18, 2024Updated 2 years ago