wrab12 / diff-amp

Related projects ⓘ

Alternatives and complementary repositories for diff-amp

• ml4bio / USPNet
  Nature Computational Science: Unbiased organism-agnostic and highly sensitive signal peptide predictor with deep protein language model
  ☆28Updated 7 months ago
• BioinfoMachineLearning / ATOMRefine
  3D equivariant graph transformer for all-atom refinement of protein tertiary structures
  ☆25Updated last year
• timkartar / DeepPBS
  Geometric deep learning of protein–DNA binding specificity
  ☆49Updated last month
• bio-ontology-research-group / deepgo2
  ☆33Updated 2 months ago
• Liuxg16 / GeoPPI
  ☆75Updated 2 years ago
• ChakradharG / PeptideBERT
  Transformer Based Language Model for Peptide Property Prediction
  ☆34Updated 3 months ago
• biomed-AI / GraphEC
  ☆25Updated 2 months ago
• wenjiegroup / ProMEP
  Zero-shot prediction of mutation effects on protein function with multimodal deep representation learning
  ☆41Updated 5 months ago
• YAndrewL / CLAPE
  contrastive learning and pre-trained encoder for protein-ligand binding sites prediction
  ☆23Updated 2 weeks ago
• zhanghaicang / carbonmatrix_public
  ☆96Updated 3 weeks ago
• UniBind / UniBind
  ☆31Updated last year
• Eikor / InstructPLM
  The first large protein language model trained follows structure instructions.
  ☆71Updated 5 months ago
• bytedance / ConfDiff
  Official Implemetation of ConfDiff (ICML'24) - Protein Conformation Generation via Force-Guided SE(3) Diffusion Models
  ☆31Updated 2 months ago
• TencentAI4S / tfold
  open source code for Tencent tFold
  ☆68Updated 6 months ago
• pengxingang / TEIM
  TEIM: TCR-Epitope Interaction Modeling
  ☆43Updated last year
• jianlin-cheng / TransFun
  Transformer for protein function prediction
  ☆22Updated 3 weeks ago
• THUNLP-MT / dyMEAN
  This repo contains the codes for our paper "End-to-End Full-Atom Antibody Design"
  ☆93Updated 7 months ago
• Wang-Lin-boop / GetPDB
  Download pdb/protein structures using Uniprot id; This script will download related PDB files, extract chains(Optional), remove duplicate…
  ☆37Updated 3 months ago
• ai4protein / Pro-FSFP
  Pro-FSFP: Few-Shot Protein Fitness Prediction
  ☆61Updated 2 months ago
• AspirinCode / AlphaPPImd
  Exploring the conformational ensembles of protein-protein complexes with transformer-based generative neural networks
  ☆25Updated 5 months ago
• CAODH / EquiScore
  ☆62Updated 10 months ago
• tymor22 / tm-vec
  ☆63Updated last month
• TencentAILabHealthcare / PALM
  ☆31Updated 8 months ago
• wyky481l / MMCD
  ☆16Updated last month
• varun-shanker / structural-evolution
  ☆82Updated 4 months ago
• biomed-AI / GraphSite
  GraphSite: protein-DNA binding site prediction using graph transformer and predicted protein structures
  ☆58Updated 3 months ago
• DeepGraphLearning / ESM-GearNet
  ESM-GearNet for Protein Structure Representation Learning (https://arxiv.org/abs/2303.06275)
  ☆79Updated last year
• westlake-repl / SaprotHub
  SaprotHub: Making Protein Modeling Accessible to All Biologists
  ☆69Updated this week
• bzho3923 / ProtLGN
  ☆25Updated 3 months ago
• tyang816 / ProtSSN
  Fusion of protein sequence and structural information, using denoising pre-training network for zero-shot protein engineering (eLife 2024…
  ☆47Updated 3 weeks ago