GIST-CSBL / AMP-BERTLinks
☆19Updated 5 months ago
Alternatives and similar repositories for AMP-BERT
Users that are interested in AMP-BERT are comparing it to the libraries listed below
Sorting:
- webserver☆23Updated 2 months ago
- HydrAMP: a deep generative model for antimicrobial peptide discovery☆51Updated 8 months ago
- A foundation model approach to guide antimicrobial peptide design in the era of artificial intelligence driven scientific discovery☆37Updated this week
- Application of deep generative model discovers novel and diverse functional peptides against microbial resistance☆11Updated 2 years ago
- Transformer Based Language Model for Peptide Property Prediction☆46Updated last year
- Generator and regressor neural networks for antimicrobial peptides☆25Updated last year
- ☆41Updated 11 months ago
- ☆16Updated 2 years ago
- Geometry-aware protein binding site predictor☆21Updated 11 months ago
- Computationally Restoring the Potency of a Clinical Antibody☆18Updated last year
- Machine learning prediction of enzyme optimum pH☆44Updated 3 months ago
- Sequence-based protein solubility prediction using multidimensional embedding☆12Updated 4 years ago
- We propose PepBCL, a novel BERT (Bidirectional Encoder Representation from Transformers)-based Contrastive Learning framework to predict …☆16Updated 2 years ago
- PepFun 2.0: improved protocols for the analysis of natural and modified peptides☆25Updated 2 years ago
- Transformer for protein function prediction☆28Updated 9 months ago
- ☆47Updated last month
- 🧬 Fusion of protein sequence and structural information, using denoising pre-training network for zero-shot protein engineering (eLife 2…☆72Updated 3 months ago
- The implementation of the paper sAMPpred-GAT: Prediction of Antimicrobial Peptide by Graph Attention Network and Predicted Peptide Struct…☆33Updated 2 years ago
- This repository contains scripts, data and jupyter notebooks used to produce the evaluation results in the BioPhi 2021 publication☆17Updated 2 years ago
- Predicting the effect of mutations on protein stability and protein binding affinity using pretrained neural networks and a ranking objec…☆22Updated 4 years ago
- Nature Computational Science: Unbiased organism-agnostic and highly sensitive signal peptide predictor with deep protein language model☆32Updated 2 months ago
- NuFold: End-to-End Approach for RNA Tertiary Structure Prediction with Flexible Nucleobase Center Representation☆46Updated last month
- ☆20Updated last year
- ☆17Updated last year
- Code and data used in https://doi.org/10.1101/2021.08.01.454656☆53Updated 3 years ago
- a deep learning architecture for protein-ligand binding affinity prediction☆76Updated last year
- Computer aided proximal decaging as a universal strategy for temporal protein activation☆23Updated 2 months ago
- ☆73Updated 11 months ago
- GraphSite: protein-DNA binding site prediction using graph transformer and predicted protein structures☆60Updated last year
- Collecting AMP MIC data from different sources, then running a GAN to output promising sequences☆81Updated last year