GIST-CSBL / AMP-BERTLinks
☆23Updated 11 months ago
Alternatives and similar repositories for AMP-BERT
Users that are interested in AMP-BERT are comparing it to the libraries listed below
Sorting:
- HydrAMP: a deep generative model for antimicrobial peptide discovery☆56Updated last year
- webserver☆26Updated 7 months ago
- A foundation model approach to guide antimicrobial peptide design in the era of artificial intelligence driven scientific discovery☆48Updated 5 months ago
- Transformer Based Language Model for Peptide Property Prediction☆48Updated last year
- ☆64Updated last month
- Application of deep generative model discovers novel and diverse functional peptides against microbial resistance☆11Updated 3 years ago
- The implementation of the paper sAMPpred-GAT: Prediction of Antimicrobial Peptide by Graph Attention Network and Predicted Peptide Struct…☆35Updated 3 years ago
- GraphSite: protein-DNA binding site prediction using graph transformer and predicted protein structures☆61Updated last year
- ☆18Updated 3 months ago
- ☆37Updated 3 years ago
- Geometry-aware protein binding site predictor☆25Updated last year
- Epitope Prediction Pipeline and analysis tools built around AlphaFold 2☆20Updated last year
- Generator and regressor neural networks for antimicrobial peptides☆25Updated 2 years ago
- Computationally Restoring the Potency of a Clinical Antibody☆19Updated last year
- a deep learning architecture for protein-ligand binding affinity prediction☆76Updated 2 years ago
- ☆49Updated 5 months ago
- ☆29Updated 10 months ago
- Nature Computational Science: Unbiased organism-agnostic and highly sensitive signal peptide predictor with deep protein language model☆35Updated 2 months ago
- Protein language model trained on coding DNA☆53Updated last year
- Exploring the conformational ensembles of protein-protein complexes with transformer-based generative neural networks☆32Updated last year
- Download pdb/protein structures using Uniprot id; This script will download related PDB files, extract chains(Optional), remove duplicate…☆46Updated last year
- Machine learning prediction of enzyme optimum pH☆50Updated 9 months ago
- Predicts the solubility and usability for purification of proteins expressed in E. coli using protein language models☆43Updated last year
- contrastive learning and pre-trained encoder for protein-ligand binding sites prediction☆36Updated 6 months ago
- ☆18Updated last year
- Code and data used in https://doi.org/10.1101/2021.08.01.454656☆54Updated 3 years ago
- Antibody Annotation - Annotate VH and VL sequences (FR and CDR) in Python☆30Updated 2 years ago
- TemStaPro - a program for protein thermostability prediction using sequence representations from a protein language model.☆71Updated last year
- ☆17Updated 2 years ago
- ☆32Updated last year