☆24Feb 20, 2025Updated last year
Alternatives and similar repositories for AMP-BERT
Users that are interested in AMP-BERT are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆16Jun 24, 2024Updated 2 years ago
- webserver☆31Jun 4, 2025Updated last year
- Code for paper "ToxIBTL: prediction of peptide toxicity based on information bottleneck and transfer learning"☆13Jan 24, 2022Updated 4 years ago
- Application of deep generative model discovers novel and diverse functional peptides against microbial resistance☆11Dec 22, 2022Updated 3 years ago
- Attentive deep learning model for antimicrobial peptide prediction☆65Jun 2, 2026Updated 3 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- ☆19Feb 25, 2026Updated 6 months ago
- Generator and regressor neural networks for antimicrobial peptides☆25Jan 30, 2024Updated 2 years ago
- A foundation model approach to guide antimicrobial peptide design in the era of artificial intelligence driven scientific discovery☆58Sep 1, 2025Updated last year
- ☆89Oct 6, 2022Updated 3 years ago
- HydrAMP: a deep generative model for antimicrobial peptide discovery☆63Nov 26, 2024Updated last year
- Designing antimicrobial peptides (AMPs) is awesome.☆37Updated this week
- Transformer Based Language Model for Peptide Property Prediction☆57Aug 2, 2024Updated 2 years ago
- Demo of diffusion models #DDPM applied to molecular dynamics of small peptide☆14Jan 26, 2024Updated 2 years ago
- ☆13Aug 18, 2023Updated 3 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Collecting AMP MIC data from different sources, then running a GAN to output promising sequences☆91Aug 2, 2024Updated 2 years ago
- ParetoDrug☆12Sep 3, 2024Updated 2 years ago
- ProtFeat is protein feature extraction tool that utilizes POSSUM and iFeature.☆20Sep 16, 2024Updated last year
- A PyTorch implementation of "Automatic Identification and Virtual Directed Evolution of Antimicrobial Peptides with Explainable Deep Lear…☆45Aug 1, 2025Updated last year
- The implementation of the paper sAMPpred-GAT: Prediction of Antimicrobial Peptide by Graph Attention Network and Predicted Peptide Struct…☆36Oct 1, 2022Updated 3 years ago
- An improved method for predicting toxicity of the peptides and designing of non-toxic peptides☆32May 8, 2026Updated 3 months ago
- AnOxPePred: Using deep learning for the prediction of antioxidative properties of peptides.☆11Dec 28, 2019Updated 6 years ago
- Multi-Task Topological Laplacian deep learning model that predicts binding free energy changes upon mutation☆14Dec 13, 2024Updated last year
- ☆17Dec 13, 2020Updated 5 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- High-throughput framework for running molecular simulations for METL☆22Sep 18, 2025Updated 11 months ago
- An official implementation of Protein Representation Learning via Knowledge Enhanced Primary Structure Reasoning☆28Jul 14, 2023Updated 3 years ago
- ☆10Jan 27, 2025Updated last year
- HemoPI2: Prediction of hemolytic activity of peptides against mammalian RBCs☆17Jul 13, 2026Updated last month
- ☆32Nov 15, 2022Updated 3 years ago
- Code and results for Machine Learning Models to Accelerate the Design of Polymeric Long-Acting Injectables☆16Sep 29, 2022Updated 3 years ago
- Complexity Based Prompting for Multi-Step Reasoning☆17Mar 10, 2023Updated 3 years ago
- Personal branch of chemprop used to predict the antibiotics Abaucin☆29May 25, 2023Updated 3 years ago
- De novo molecular design with deep molecular generative models for protein-protein interaction(PPI) inhibitors☆22Nov 6, 2024Updated last year
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Antimicrobial Peptide Structural Evolution Miner (AMP-SEMiner), an integrated AI framework designed for the simultaneous identification o…☆15May 10, 2025Updated last year
- DeepMP is a computational tool to detect DNA modifications in Nanopore sequencing data☆27Mar 18, 2022Updated 4 years ago
- SMARTS: 'regular expressions' for chemical structures☆24Jun 21, 2018Updated 8 years ago
- Sequence-based protein solubility prediction using multidimensional embedding☆13Apr 19, 2021Updated 5 years ago
- A long-read SV calling pipeline☆12Aug 13, 2021Updated 5 years ago
- A nextflow pipeline for performing bacterial RNA-Seq data analysis☆14Updated this week
- The official implementation for SETA (TIP 2024).☆12Feb 17, 2025Updated last year