ZengJiaxiong / Phosphorus-cycling-databaseLinks
This is a comprehensive database for fast and accurately analyzing the phosphorus cycling genes.
☆31Updated 3 years ago
Alternatives and similar repositories for Phosphorus-cycling-database
Users that are interested in Phosphorus-cycling-database are comparing it to the libraries listed below
Sorting:
- ☆52Updated 2 weeks ago
- ☆49Updated 4 years ago
- ☆20Updated 10 months ago
- ☆26Updated 2 years ago
- code repo for mobileOG-db☆39Updated last month
- This program is designed for annotation of antimicrobal resistance(AMR), transposon(Tn) and integron(In) in bacteria.☆21Updated 2 years ago
- Structural and functional annotation of eukaryotic metagenome-assembled genomes☆22Updated 2 years ago
- EzAAI - High Throughput Prokaryotic AAI Calculator☆42Updated last week
- Downstream processing of VAMB binning for Viral Elucidation☆50Updated last year
- ☆14Updated 3 months ago
- Pipeline for identification of eukaryotic contigs in metagenomic assemblies☆13Updated last year
- ☆13Updated last year
- Predicting plasmid contigs from assemblies using single copy marker genes, plasmid genes, kmers - Developed by Linda van der Graaf☆49Updated last year
- SCAPP is a plasmid assembly tool. This tool is described in our paper: https://microbiomejournal.biomedcentral.com/articles/10.1186/s4016…☆32Updated 2 years ago
- ☆32Updated last month
- ☆25Updated 6 years ago
- ☆17Updated 8 months ago
- Scripts to quality control for metagenomic raw data, including removing the adapters, low quality reads, bases or PCR duplicates☆18Updated 4 years ago
- Improvement of metagenome-assembled genomes☆53Updated 5 years ago
- This is a collection of scripts for analyzing mixed 16S/18S amplicon sequences using tools such as qiime2, DADA2, deblur, and bbtools☆32Updated 3 weeks ago
- An accurate and sensitive bacterial plasmid identification tool based on deep machine-learning of shared k-mers and genomic features.☆44Updated 2 years ago
- PlasX, a machine learning classifier for identifying plasmid sequences based on genetic architecture☆37Updated 3 years ago
- Horizontal gene transfer (HGT) identification pipeline☆61Updated 2 years ago
- MicrobeCensus estimates the average genome size of microbial communities from metagenomic data☆46Updated 5 years ago
- ☆44Updated 3 weeks ago
- This is the source code for ARGs-OAP v2.0 construction☆12Updated 5 years ago
- Antibiotic resistance genes (ARGs) have accelerated microbial threats to human health during the last decade. Here we determined the risk…☆16Updated 3 years ago
- ☆56Updated last year
- Ready-to-use pipeline to detect, count and identify the hgcAB genes, involved in mercury methylation, from metagenomes☆10Updated last year
- HMM-based identification and categorization of iron genes and iron gene operons in genomes and metagenomes☆60Updated 3 years ago