joy50706 / iAMPCN
☆12Updated 9 months ago
Alternatives and similar repositories for iAMPCN:
Users that are interested in iAMPCN are comparing it to the libraries listed below
- Attentive deep learning model for antimicrobial peptide prediction☆43Updated last week
- ☆24Updated last year
- ☆10Updated 2 weeks ago
- ☆11Updated 3 months ago
- UniProt Id Mapping through API☆31Updated 5 months ago
- Feature map and function annotation of Proteins☆32Updated 9 months ago
- scripts for predicting natural product activity from biosynthetic gene cluster sequences☆23Updated 2 years ago
- Viral protein family functional prediction using protein language models☆18Updated 10 months ago
- A method to predict DNA shape features considering farther flanking region.☆29Updated 6 months ago
- This project proposes to contribute to fill the knowledge gap about Covid-19SARS-CoV-2 in Brazil and with the global knowledge about the …☆14Updated last year
- DeepSig - Predictor of signal peptides in proteins based on deep learning☆26Updated 2 years ago
- A quick and easy way to download the genomes/predicted proteins of taxa available in JGI's Genome Portal.☆35Updated 6 months ago
- A PyTorch implementation of "Automatic Identification and Virtual Directed Evolution of Antimicrobial Peptides with Explainable Deep Lear…☆19Updated last month
- GCN classifier for phage taxanomy classification☆31Updated 4 months ago
- SMBGC Annotation using Neural Networks Trained on Interpro Signatures☆26Updated 3 weeks ago
- antimicrobial peptide prediction in R☆29Updated 3 months ago
- A tool for scanning FASTA protein sequences against a library of Pfam HMMs☆13Updated 2 years ago
- Snakemake workflow for the analysis of biosynthetic gene clusters across large collections of genomes (pangenomes)☆41Updated 3 months ago
- DeepECtransformer☆24Updated last year
- The 3DFI pipeline predicts the 3D structure of proteins and searches for structural homology in the 3D space.☆19Updated last year
- Conservation analysis of homologous proteins with Python☆10Updated 3 years ago
- A machine learning model for the prediction of optimal growth temperature of microorganisms and enzyme catalytic optima☆55Updated 4 years ago
- VirID: An integrated platform for the discovery and characterization of RNA Viruses☆18Updated last month
- ☆8Updated 6 months ago
- Software for predicting translation initiation rates in bacteria☆22Updated 4 months ago
- An R interface to the omixer-rpm for turning metagenomic functional profiles into pathway/module profiles☆11Updated 2 years ago
- Code for LazyAF pipeline☆21Updated last year
- Transmembrane proteins predicted through Language Model embeddings☆35Updated 2 months ago
- A Python package for discovery, annotation, and analysis of gene clusters in genomics or metagenomics data sets.☆21Updated 3 years ago
- Prediction of horizontal gene transfer (HGT) using graph convolutional network☆12Updated 2 years ago