HongWuL / sAMPpred-GATLinks
The implementation of the paper sAMPpred-GAT: Prediction of Antimicrobial Peptide by Graph Attention Network and Predicted Peptide Structure
☆34Updated 3 years ago
Alternatives and similar repositories for sAMPpred-GAT
Users that are interested in sAMPpred-GAT are comparing it to the libraries listed below
Sorting:
- DeepGraphGO: graph neural network for large-scale, multispecies protein function prediction☆34Updated 4 years ago
- GraphSite: protein-DNA binding site prediction using graph transformer and predicted protein structures☆62Updated last year
- Transformer-based protein function Annotation with joint feature-Label Embedding☆35Updated 10 months ago
- InterLabelGO+: Unraveling label correlations in protein function prediction☆14Updated 2 months ago
- Accurate prediction of protein intrinsic disorder and its functions using graph-based interaction protein language model☆22Updated last year
- A structure-aware interpretable deep learning model for sequence-based prediction of protein-protein interactions☆103Updated last week
- ☆55Updated 2 months ago
- Protein language model trained on coding DNA☆51Updated last year
- Geometric deep learning of protein–DNA binding specificity☆77Updated 7 months ago
- Download pdb/protein structures using Uniprot id; This script will download related PDB files, extract chains(Optional), remove duplicate…☆44Updated last year
- a deep learning architecture for protein-ligand binding affinity prediction☆76Updated last year
- ☆13Updated last year
- ☆22Updated 2 years ago
- Nature Computational Science: Unbiased organism-agnostic and highly sensitive signal peptide predictor with deep protein language model☆35Updated 5 months ago
- ☆37Updated 2 years ago
- ☆17Updated 2 weeks ago
- ☆20Updated 8 months ago
- Interpretable bilinear attention network with domain adaptation improves drug-target prediction.☆132Updated 2 years ago
- ☆56Updated last year
- ☆17Updated last year
- ☆43Updated 2 months ago
- Fast and accurate protein function prediction from sequence through pretrained language model and homology-based label diffusion☆42Updated last year
- ☆86Updated 3 years ago
- S-PLM: Structure-aware Protein Language Model via Contrastive Learning between Sequence and Structure☆68Updated 4 months ago
- This is the repository for PIPR. This repository contains the source code and links to some datasets used in the ISMB/ECCB-2019 paper "Mu…☆106Updated 2 years ago
- SGPPI: structure-aware prediction of protein-protein interactions in rigorous conditions with graph convolutional network☆14Updated 2 years ago
- Protein-protein interaction sites prediction through combining local and global features with deep neural networks☆54Updated 6 years ago
- ☆46Updated last year
- RiboNucleic Acid (RNA) Language Model☆135Updated last month
- TransformerCPI: Improving compound–protein interaction prediction by sequence-based deep learning with self-attention mechanism and label…☆151Updated 3 years ago