maxkarlsson / HPA-SingleCellTypeLinks
☆14Updated 3 years ago
Alternatives and similar repositories for HPA-SingleCellType
Users that are interested in HPA-SingleCellType are comparing it to the libraries listed below
Sorting:
- Collection of functions created and/or curated to aid in the visualization and analysis of single-cell data using R.☆16Updated 4 years ago
- Harvard FAS informatics scRNAseq workshop website☆38Updated 6 years ago
- Human brain, >200,000 nuclei☆23Updated 4 years ago
- Bulk-Sequence Single-Cell Gene Expression Deconvolution Pipeline☆46Updated 2 years ago
- R/Bioconductor package for working with 10x scATACseq data☆41Updated 2 years ago
- scWGCNA☆61Updated 3 years ago
- Dichotomous of innate immune landscape☆17Updated 6 years ago
- ☆56Updated 5 years ago
- Discover differential transcript usage from polyA-captured single cell RNA-seq data☆53Updated 2 years ago
- An R package to download and merge labeled single-cell RNA-seq data from the PanglaoDB database into a Seurat object.☆26Updated 2 years ago
- Collection of useful methods for single cell analysis☆15Updated last year
- GEfetch2R - Access Single-cell/Bulk RNA-seq Data from Public Repositories and Benchmark the Subsequent Format Conversion Tools☆39Updated last week
- ☆43Updated 5 years ago
- ConsensusTME Gene Sets and R Script☆39Updated last year
- R package (compatible with SCope) to create generic .loom files and extend them with other data e.g.: SCENIC regulons, Seurat clusters an…☆47Updated 3 years ago
- Code for the manuscript "Single-cell analysis of human primary prostate cancer reveals the heterogeneity of tumor-associated epithelial c…☆25Updated 3 years ago
- ☆48Updated last year
- SIB/Scilifelab autumn school in single cell omics 2019.☆22Updated 6 years ago
- Analysis cell-type-specific functional gene network, with SCINET and HumanNetv3☆45Updated 5 months ago
- Public code repository for the Banovich Lab at the Translational Genomics Research Institute (TGen).☆48Updated 2 years ago
- Bioconductor package esATAC: an Easy-to-use Systematic pipeline for ATAC-seq data analysis☆23Updated 3 years ago
- Compendium to "A Systematic Evaluation of Single Cell RNA-Seq Analysis Pipelines"☆55Updated 4 years ago
- ☆23Updated last year
- Pipeline for characterizing metebolic heterogeneity from single-cell RNA-seq data☆22Updated 4 years ago
- CellR: single-cell RNA-Seq guided deconvolution of cellular composition from bulk-tissue RNA-Seq☆19Updated 4 years ago
- An R package to analyze single-cell V(D)J data☆28Updated 2 years ago
- ☆47Updated 5 years ago
- Epigenetic cell-type deconvolution from Single-Cell Omic Reference profiles☆32Updated 10 months ago
- R package for specialised analysis of single cell data☆40Updated 3 years ago
- scripts for the integrating ATAC-seq, RNA-seq and CHi-C paper☆25Updated 3 years ago