Rust Backend for PyRanges Operations. More featureful and much faster replacement for the NCLS library
☆30Apr 16, 2026Updated last week
Alternatives and similar repositories for ruranges_py
Users that are interested in ruranges_py are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Bam to Pandas DataFrame, quickly☆13May 10, 2025Updated 11 months ago
- A Rust library and command line tool for working with genomic ranges and their data.☆100May 29, 2024Updated last year
- Gencode UTR fix☆17Jan 11, 2023Updated 3 years ago
- The python binding for D4 format☆16Oct 22, 2021Updated 4 years ago
- Oxbow makes genomic data ready for high-performance analytics.☆153Mar 21, 2026Updated last month
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- ☆22Oct 6, 2023Updated 2 years ago
- Library for visualising genomic features in Python.☆15May 12, 2017Updated 8 years ago
- Pyranges: a Python framework for ultrafast sequence interval operations☆53Apr 21, 2026Updated last week
- A lightweight reimplementation of some of the algorithms in the MEME suite in Python.☆32Mar 17, 2026Updated last month
- Fast genomics quality control tools for sequencing data, written in Rust.☆93Apr 21, 2026Updated last week
- Container class to represent genomic locations and support genomic analysis☆27Updated this week
- Automatically annotate cell types, consistently across samples.☆20Updated this week
- Alternative polyadenylation detection from diverse data sources such as 3'-seq, long-read and short-reads.☆35Nov 8, 2023Updated 2 years ago
- Single-cell Hi-C data analysis toolbox☆28Aug 13, 2021Updated 4 years ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- Fishers Exact Test for Python (Cython)☆65Mar 20, 2025Updated last year
- Blazing-Fast Bioinformatic Operations on Python DataFrames☆158Updated this week
- omniCLIP is a CLIP-Seq peak caller☆16Nov 14, 2020Updated 5 years ago
- A high-performance BigWig and BigBed library in Rust☆113Feb 13, 2026Updated 2 months ago
- An R package for Splice-aware quantification of translation using Ribo-seq data☆19Dec 20, 2023Updated 2 years ago
- Demonstration of the use of an R package to organize a data analysis project☆23Mar 30, 2020Updated 6 years ago
- Converts 'MultiQC' Reports into Tidy Data Frames☆19Apr 1, 2024Updated 2 years ago
- NCLS. Basically a static interval-tree that is silly fast for both construction and lookups. Deprecated but maintained.☆223Jul 4, 2025Updated 9 months ago
- splicing and feature maps for RBPs