hamidghaedi / RNA-seq-differential-expression
Differential gene expression analysis on RNA-seq data
☆11Updated 8 months ago
Alternatives and similar repositories for RNA-seq-differential-expression:
Users that are interested in RNA-seq-differential-expression are comparing it to the libraries listed below
- ☆57Updated 8 months ago
- This is a tutorial to guide the analysis of RNAseq dataset using footprint based tools such as DOROTHEA, PROGENY and CARNIVAL☆55Updated last year
- From RNA-seq raw reads to enriched pathways by DEGs☆32Updated 8 months ago
- SIB course on single cell transcriptomics by mostly using the Seurat pipeline☆78Updated last month
- Accompanying code for the tutorial: Annotating single cell transcriptomic maps using automated and manual methods☆89Updated last year
- ☆57Updated 4 years ago
- Analysis pipeline for ATAC-seq data☆44Updated last year
- My youtube programming scripts☆47Updated this week
- Analysis Workflow for Assay for Transposase-Accessible Chromatin using sequencing (ATAC-Seq)☆75Updated last year
- Convert Counts to Fragments per Kilobase of Transcript per Million (FPKM)☆62Updated 3 years ago
- Basic workflow for ATAC-seq analysis☆72Updated 10 months ago
- A complete guide for analyzing bulk RNA-seq data. Go from raw FASTQ files to mapping reads using STAR and differential gene expression an…☆73Updated 4 years ago
- Step-by-step analysis pipeline for RNA-seq data☆87Updated last year
- ☆61Updated last year
- ☆77Updated last year
- A list of alternative splicing analysis resources☆41Updated 2 months ago
- 2017_2018 single cell RNA sequencing Workshop UCD_UCB_UCSF☆35Updated 6 years ago
- coding exercise using TCGA immune infiltration data☆43Updated 11 months ago
- ISCB DC Area Regional Student Group - Summer 2016 Workshop☆48Updated 8 years ago
- Microbial analysis in TCGA data☆90Updated 10 months ago
- A pipeline to process m6A-seq data and down stream analysis.☆43Updated 4 years ago
- ☆64Updated last year
- This RNAseq data analysis tutorial is created for educational purpose☆31Updated 3 months ago
- ☆85Updated 6 months ago
- Integrative pathway enrichment analysis of multivariate omics data☆104Updated 5 months ago
- Notes on ChIP-seq and other-seq-related tools☆23Updated last week
- ☆52Updated this week
- A step-by-step tutorial for Weighted correlation network analysis (WGCNA)☆64Updated 2 years ago
- tools for working with Bisulfite Sequencing data while preserving reads intrinsic dependencies☆139Updated this week
- collection of notebooks with different cytoscape workflows☆49Updated last year