cancer-evolution / SPIAT
Spatial Image Analysis of Tissues
☆15Updated 2 years ago
Alternatives and similar repositories for SPIAT
Users that are interested in SPIAT are comparing it to the libraries listed below
Sorting:
- Immune Cell Gene Signatures for Profiling the Microenvironment of Solid Tumours☆27Updated 4 years ago
- Compute the neighborhood consolidation matrix and identify SHRs☆13Updated 3 months ago
- CellR: single-cell RNA-Seq guided deconvolution of cellular composition from bulk-tissue RNA-Seq☆18Updated 3 years ago
- An R/Bioconductor package to identify higher-order molecular phenotypes☆15Updated last year
- Code to reproduce TNBC analysis and figures☆23Updated 2 years ago
- Human brain, >200,000 nuclei☆24Updated 3 years ago
- Detection of allele-specific subclonal copy number alterations from single-cell transcriptomic data.☆36Updated this week
- Collection of functions created and/or curated to aid in the visualization and analysis of single-cell data using R.☆16Updated 3 years ago
- Cell-type Relationship Analysis Workflow Done Across Distances☆31Updated 2 months ago
- ☆22Updated 6 months ago
- Spatially-resolved Transcriptomics via Epitope Anchoring☆19Updated last year
- ☆16Updated last month
- FastIntegrate integrates thousands of scRNA-seq datasets and outputs batch-corrected values for downstream analysis☆23Updated 6 months ago