Converts Ensembl, Uniprot, and HGNC IDs to Entrez Gene Id
☆47Jul 20, 2023Updated 2 years ago
Alternatives and similar repositories for pyEntrezId
Users that are interested in pyEntrezId are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A simple Python interface to the NCBI databases (Entrez).☆25Dec 22, 2025Updated 6 months ago
- A python library for accessing 2bit files☆21Apr 21, 2026Updated 2 months ago
- Using Biopython's Bio.Entrez package to Access NCBI Entrez databases☆16Jun 26, 2014Updated 12 years ago
- 整合型的对于生物学注释的信息/GO和KEGG全谱注释和富集☆14Nov 8, 2017Updated 8 years ago
- Evaluation Toolkit for Machine Learning Model Understanding☆11Mar 25, 2025Updated last year
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- biochem4j: integrated and extensible biochemical knowledge through graph databases☆12Apr 12, 2018Updated 8 years ago
- ISB CGC Webapp☆12Dec 3, 2025Updated 6 months ago
- Mapping NCBI Genbank accession to GTDB accession☆14Feb 13, 2021Updated 5 years ago
- Nextflow plugin implementation skeleton☆11Sep 1, 2025Updated 9 months ago
- A Generative Pre-Trained Transformer Package for Pangenomes☆53May 19, 2025Updated last year
- A pretrained single cell gene expression language model☆13Jun 6, 2023Updated 3 years ago
- scMatch: a single-cell gene expression profile annotation tool using reference datasets☆27Jan 25, 2022Updated 4 years ago
- micca - MICrobial Community Analysis☆19Feb 12, 2020Updated 6 years ago
- Blue Collar Bioinformatics website☆10Apr 30, 2024Updated 2 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Monoclonal Antibody GEnerator (MAGE) - a fine-tuned LLM for generating paired heavy-light antibody variable sequences with predicted bind…☆78Jan 15, 2026Updated 5 months ago
- Quantitative Insights Into Microbial Ecology - parsing and plotting functions for R☆18May 19, 2017Updated 9 years ago
- Example scripts for analyzing CUT&RUN datasets☆13Oct 3, 2018Updated 7 years ago
- Tool for Motif Deconvolution in large HLA-II ligand datasets without the need of prior alignment.☆15Feb 17, 2025Updated last year
- Minor Variant Calling and Phasing Tools☆15Jan 13, 2022Updated 4 years ago
- ☆14May 18, 2026Updated last month
- CArbohydrate-Protein Site IdentiFier☆16Aug 22, 2023Updated 2 years ago
- Shell bootloader for data science.☆11Jun 22, 2026Updated last week
- ☆20May 24, 2025Updated last year
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Mark2Cure allows anyone that can read English, regardless of background, to help in the process of biomedical discovery.☆14Jan 11, 2023Updated 3 years ago
- ☆11Sep 7, 2023Updated 2 years ago
- ☆10Apr 21, 2024Updated 2 years ago
- Cookiecutter profile for making a NextFlow-based bioinformatics tool☆17Jul 8, 2024Updated last year
- multi-resolution clustering of omics data☆14Apr 9, 2025Updated last year
- Opossum is a tool to pre-process RNA-seq reads prior to variant calling.☆28Jul 7, 2018Updated 7 years ago
- Comprehensive Python client for the Uniprot REST API☆57Oct 6, 2025Updated 8 months ago
- A python package to explore pathways, diseases and drugs associated to a list of targets (genes, proteins, etc)☆20Jun 4, 2026Updated 3 weeks ago
- Multiple sequence alignment browser☆11Dec 12, 2022Updated 3 years ago
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- BiGMeC - Biosynthetic Gene cluster Metabolic pathway Constructor☆16May 14, 2023Updated 3 years ago
- Adaptive haplotype assembly for efficiently leveraging high coverage in long reads☆13Sep 4, 2018Updated 7 years ago
- Hybrid Error Correction of Long Reads using Iterative Learning☆10Sep 27, 2018Updated 7 years ago
- Galaxy Docker Image for the HiCExplorer☆11Mar 3, 2019Updated 7 years ago
- Perl scripts for analysis RIC-seq data☆11Feb 6, 2020Updated 6 years ago
- Download files from NCBI Entrez by accession☆134Sep 3, 2024Updated last year
- A tool for simulating random mutations in any genome☆43Feb 7, 2024Updated 2 years ago