lwgray / pyEntrezId

Related projects ⓘ

Alternatives and complementary repositories for pyEntrezId

• jrderuiter / pybiomart
  A simple pythonic interface to biomart.
  ☆55Updated 4 years ago
• gpp-rnd / rs3
  Package to Score Sequences using Rule Set 3
  ☆10Updated 8 months ago
• dincarnato / RNAFramework
  RNA structure probing and post-transcriptional modifications mapping high-throughput data analysis
  ☆35Updated 3 weeks ago
• GfellerLab / MixMHC2pred
  HLA-II ligand predictor.
  ☆35Updated last year
• mnielLab / netTCR
  predicting peptide and TCR interaction
  ☆20Updated 3 years ago
• brineylab / grp-paper
  Code and data used in The Great Repertoire Project
  ☆29Updated 3 years ago
• mousepixels / sanbomics
  bioinformatics plotting and tools
  ☆53Updated 5 months ago
• openvax / mhctools
  Python interface to running command-line and web-based MHC binding predictors
  ☆89Updated last month
• KarchinLab / mhcnuggets
  MHC Class I and Class II neoantigen binding prediction
  ☆26Updated last year
• snugel / cas-offinder
  An ultrafast and versatile algorithm that searches for potential off-target sites of CRISPR/Cas-derived RNA-guided endonucleases.
  ☆86Updated 2 years ago
• sebriois / biomart
  Python biomart API
  ☆63Updated last year
• uio-bmi / compairr
  Comparison of Adaptive Immune Receptor Repertoires
  ☆25Updated last year
• crowelab / PyIR
  Immunoglobulin and T-Cell receptor rearrangement software
  ☆47Updated last year
• qmarcou / IGoR
  IGoR is a C++ software designed to infer V(D)J recombination related processes from sequencing data. Find full documentation at:
  ☆48Updated 2 years ago
• kircherlab / CADD-scripts
  CADD scripts release for offline scoring. For more information about CADD, please visit our website
  ☆74Updated last week
• hbc / NGS_Data_Analysis_Course
  ☆22Updated 8 years ago
• zwang-bioinformatics / GOGO
  An Improved Algorithm to Measure the Semantic Similarity of Gene Ontology Terms
  ☆17Updated 4 years ago
• uc-bd2k / GREIN
  GREIN : GEO RNA-seq Experiments Interactive Navigator
  ☆48Updated 5 years ago
• nf-core / mhcquant
  Identify and quantify MHC eluted peptides from mass spectrometry raw data
  ☆33Updated 3 weeks ago
• murphycj / AGFusion
  Python package to annotate and visualize gene fusions.
  ☆60Updated last month
• dmnfarrell / smallrnaseq
  small rna-seq analysis package
  ☆29Updated 2 years ago
• kmayerb / tcrdist3
  flexible CDR based distance metrics
  ☆55Updated 3 months ago
• Teichlab / bracer
  BraCeR - reconstruction of B cell receptor sequences from single-cell RNAseq data
  ☆41Updated 2 months ago
• andrewrech / antigen.garnish
  ☆46Updated 2 years ago
• EBIvariation / CMAT
  ClinVar Mapping and Annotation Toolkit
  ☆19Updated last month
• ctokheim / deepDegron
  Deep learning model to predict degron sequences
  ☆18Updated last year
• tomazc / iCount
  iCount, protein-RNA interaction analytics
  ☆23Updated 2 years ago
• uio-bmi / immuneML
  immuneML is a platform for machine learning analysis of adaptive immune receptor repertoire data.
  ☆62Updated this week
• maximilianh / crisporPaper
  Code for the CRISPOR article, all data and code to create figures and analysis
  ☆41Updated 8 years ago
• saketkc / pyseqlogo
  Python package to plot sequence logos
  ☆29Updated last year