lwgray / pyEntrezIdLinks
Converts Ensembl, Uniprot, and HGNC IDs to Entrez Gene Id
☆46Updated 2 years ago
Alternatives and similar repositories for pyEntrezId
Users that are interested in pyEntrezId are comparing it to the libraries listed below
Sorting:
- Python interface to running command-line and web-based MHC binding predictors☆98Updated last year
- mygene is an easy-to-use Python wrapper to access MyGene.Info services.☆94Updated 8 months ago
- Python biomart API☆68Updated 2 years ago
- Parsing tools for GTF (gene transfer format) files☆121Updated 7 months ago
- immuneML is a platform for machine learning analysis of adaptive immune receptor repertoire data.☆69Updated last week
- Reproducible bioinformatics pipelines in python. Import any Unix tool/command in python.☆84Updated 4 years ago
- A simple pythonic interface to biomart.☆56Updated 5 years ago
- MyGene.info: A BioThings API for gene annotations☆128Updated last month
- Identify and quantify MHC eluted peptides from mass spectrometry raw data☆38Updated this week
- bioinformatics plotting and tools☆59Updated last year
- Code for the CRISPOR article, all data and code to create figures and analysis☆44Updated 9 years ago
- MHC Class I and Class II neoantigen binding prediction☆32Updated 2 months ago
- ☆38Updated last year
- Predicting gene expression levels from genomic sequences☆54Updated 5 years ago
- CADD scripts release for offline scoring. For more information about CADD, please visit our website☆86Updated 4 months ago
- ☆67Updated 7 months ago
- Fast Gene Set Enrichment Analysis (GSEA) implementation of the prerank algorithm. Use Loess interpolation of bimodal ES distribution for …☆52Updated 4 months ago
- IGoR is a C++ software designed to infer V(D)J recombination related processes from sequencing data. Find full documentation at:☆51Updated 3 years ago
- Immunoglobulin and T-Cell receptor rearrangement software☆50Updated last year
- Regression-based annotation of protein-coding sequences from ribosome profiling data☆32Updated 5 years ago
- B- and T-cell receptor sequence annotation, simulation, clonal family and germline inference, and affinity prediction☆59Updated this week
- GeneWalk identifies relevant gene functions for a biological context using network representation learning☆131Updated last year
- A Python implementation of edgeR for differential expression analysis☆103Updated 6 years ago
- Prize-Collecting Steiner Forests for Interactomes☆62Updated last year
- CDR3 clustering module providing a new method for fast and accurate clustering of large data sets of CDR3 amino acid sequences, and offer…☆54Updated last year
- Code and data used in The Great Repertoire Project☆29Updated 4 years ago
- Multi-omics Autoencoder Integration: Deep learning-based heterogenous data analysis toolkit☆49Updated 2 years ago
- Extension of the WGCNA program to improve the eigengene similarity of modules and increase the overall number of genes in modules.☆65Updated 4 years ago
- Stitchr - a Python script to stitch together coding TCR nucleotide sequences from V, J, and CDR3 info☆59Updated last month
- DRUGZ software☆23Updated 4 years ago