jamesware / alleleFrequencyAppLinks
Allele frequency filter app
☆14Updated 3 years ago
Alternatives and similar repositories for alleleFrequencyApp
Users that are interested in alleleFrequencyApp are comparing it to the libraries listed below
Sorting:
- Allele frequency filtering for Mendelian variant discovery☆17Updated 8 years ago
- Interactive table from gemini output☆10Updated 6 years ago
- Callable Cancer Loci - assessment of sequencing coverage for actionable and pathogenic loci in cancer☆21Updated 4 years ago
- Ximmer is a system for CNV calling on exome and targeted genomic sequencing☆19Updated 4 months ago
- RNA-seq quantifications: gene expression responses to human rhinovirus infection for 6 asthmatic and 6 non-asthmatic donors (SRP046226)☆19Updated 7 years ago
- R Interface to the NCBI SRA metadata☆23Updated 6 years ago
- iAnnotateSV is a Python library and command-line software toolkit to annotate and visualize structural variants detected from Next Genera…☆16Updated 2 months ago
- Allele-Specific Quantification of Structural Variations in Cancer Genomes☆17Updated 6 years ago
- DRAGEN Tumor/Normal workflow post-processing☆22Updated last year
- BreakSeq2: Ultrafast and accurate nucleotide-resolution analysis of structural variants☆24Updated 9 years ago
- Pipeline to filter whole exome vcf files and generate a report document for clinical diagnostics.☆14Updated 5 years ago
- ☆11Updated 6 years ago
- A set of tools to annotate VCF files with expression and readcount data☆29Updated 3 months ago
- The original version of MGA has been archived - please see https://github.com/crukci-bioinformatics/mga2 instead.☆25Updated 4 years ago
- Unfazed by genomic variant phasing☆26Updated last year
- GARFIELD-NGS: Genomic vARiants FIltering by dEep Learning moDels in NGS☆17Updated 6 years ago
- Visualisation and prioritisation of genomic variants from human exome sequencing projects☆13Updated 6 years ago
- Nextflow implementation of the GATK HaplotypeCaller pipeline☆13Updated 3 months ago
- A small repo for storing the code for making the files and html for CCRs.☆22Updated 5 years ago
- extract SV signal from a BAM☆11Updated 6 years ago
- Nextflow workflow for automatic repeat detection, classification and masking☆13Updated 7 years ago
- ☆21Updated 2 months ago
- Simultaneous detection of SNPs and Indels using a 16-genotype probabilistic model☆27Updated last year
- CLI to automate Nextflow pipeline testing☆12Updated this week
- Machine learning use cases for teaching☆13Updated 7 years ago
- Improved multi-sample transcript abundance estimates using adaptive priors☆20Updated 6 years ago
- Clinical Variant Annotation Pipeline☆10Updated 5 years ago
- Exhaustive capture of biological variation in RNA-seq data through k-mer decomposition.☆15Updated 6 years ago
- ☆13Updated 8 years ago
- ☆22Updated this week