Alternatives and similar repositories for entrez:

Users that are interested in entrez are comparing it to the libraries listed below

• openvax / varcode
  Library for manipulating genomic variants and predicting their effects
  ☆84Updated 8 months ago
• biocommons / eutils
  simplified searching, fetching, and parsing records from NCBI using their E-utilities interface
  ☆59Updated 9 months ago
• genepattern / genepattern-notebook
  Platform for integrating genomic analysis with Jupyter Notebooks.
  ☆44Updated 7 months ago
• apierleoni / BioGraPy
  Biological Graphic tool in Python
  ☆34Updated 4 years ago
• bxlab / bx-python
  Tools for manipulating biological data, particularly multiple sequence alignments
  ☆155Updated 6 months ago
• nspies / genomeview
  An extensible python-based genomics visualization engine
  ☆144Updated last year
• FRED-2 / Fred2
  Python-based framework for computational immunomics
  ☆40Updated 3 years ago
• lgautier / fastq-and-furious
  Efficient handling of FASTQ files from Python
  ☆51Updated 6 months ago
• lwgray / pyEntrezId
  Converts Ensembl, Uniprot, and HGNC IDs to Entrez Gene Id
  ☆45Updated last year
• openvax / pepdata
  Python interface to amino acid properties and IEDB
  ☆56Updated 5 months ago
• brentp / pyfasta
  fast, memory-efficient, pythonic (and command-line) access to fasta sequence files
  ☆87Updated 7 years ago
• audy / bioinformatics-hacks
  Scripts for miscelleneous bioinformatics tasks
  ☆49Updated 4 years ago
• gmcvicker / genome
  Python library and scripts for retrieval and storage of genomics data in HDF5 format
  ☆26Updated 5 years ago
• brentp / fishers_exact_test
  Fishers Exact Test for Python (Cython)
  ☆64Updated last week
• SamStudio8 / majora2
  Malleable All-seeing Journal Of Research Artifacts
  ☆36Updated last year
• jvrana / benchling-api
  A python wrapper for the benchling api
  ☆50Updated 4 years ago
• biosustain / goodbye-genbank
  A Python package for Biopython that gives feature annotations from GenBank records a new and better life
  ☆14Updated 8 years ago
• bio-tools / biotoolsRegistry
  biotoolsregistry : discovery portal for bioinformatics
  ☆75Updated this week
• kundajelab / ENCODE_downloader
  Downloader for ENCODE
  ☆32Updated 4 years ago
• ginkgobioworks / edge
  Efficiently keep track of changes to genomes
  ☆38Updated 8 months ago
• maximilianh / crisporPaper
  Code for the CRISPOR article, all data and code to create figures and analysis
  ☆40Updated 8 years ago
• dvklopfenstein / ReactomePy
  Explore biomolecular pathways in Reactome from the command-line or a Python script
  ☆23Updated 5 months ago
• boscoh / uniprot
  retrieve protein sequence identifiers and metadata from http://uniprot.org
  ☆67Updated 3 years ago
• stevetsa / awesome-microbes
  List of computational resources for analyzing microbial sequencing data.
  ☆68Updated last year
• dib-lab / dammit
  just annotate it, dammit!
  ☆91Updated last year
• widdowquinn / 2018-03-06-ibioic
  Teaching materials for 6-7th March 2018 delivery of introductory bioinformatics training course for IBioIC.
  ☆20Updated 7 years ago
• clintval / genome-browser
  A lightweight Python graphing API for genomic features
  ☆15Updated 2 years ago
• Edinburgh-Genome-Foundry / Geneblocks
  Find common blocks and differences between DNA sequences
  ☆41Updated 2 years ago
• jrjhealey / bioinfo-tools
  Just a collection of (often poor) scripts to do various bits of bioinformatics stuff I find myself needing to do.
  ☆59Updated 4 years ago
• mdshw5 / fastqp
  Simple FASTQ quality assessment using Python
  ☆108Updated 3 years ago