Convert sequence IDs between ucsc/refseq/genbank
☆16Aug 28, 2018Updated 8 years ago
Alternatives and similar repositories for Master_gff3_parser
Users that are interested in Master_gff3_parser are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Modelling insertion efficiency for Prime Insertion Experiments☆13Apr 1, 2024Updated 2 years ago
- Modify existing reference fasta and gff3/gtf files to include a new sequence☆32Feb 27, 2026Updated 6 months ago
- Simple tokenised template system for SGE☆10Mar 1, 2023Updated 3 years ago
- Selective and Recursive local Assembler☆15Jan 31, 2022Updated 4 years ago
- Genome Annotation for the Masses☆36Jul 9, 2017Updated 9 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Importing and manipulating Hi-C data in R☆12Apr 29, 2026Updated 4 months ago
- ☆21Dec 26, 2025Updated 8 months ago
- A python wrapper for the benchling api☆48Sep 11, 2020Updated 6 years ago
- An analysis of Arabidopsis RNA-seq data (hy5 mutant and wt, two replicates each; SRA accession SRX029582)☆16Jul 3, 2012Updated 14 years ago
- Django website project for common sequence search tools.☆17Apr 9, 2026Updated 5 months ago
- Sample an approximate number of reads from a fastq file without reading the entire file☆11Jun 20, 2017Updated 9 years ago
- A collection of open source bioinformatics tools developed and used by Addgene.☆11Jun 25, 2026Updated 2 months ago
- A collection of scripts developed to interact with fasta, fastq and sam/bam files.☆52Jul 11, 2016Updated 10 years ago
- Indel-aware consensus for aligned BAM☆21Aug 16, 2025Updated last year
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Conversion XSLTs for NCBI Eutilities XML to JSON☆15Nov 9, 2016Updated 9 years ago
- defusion☆14Aug 24, 2021Updated 5 years ago
- Implementing semantically rich NeXML I/O in R☆15May 6, 2024Updated 2 years ago
- The python binding for D4 format☆16Oct 22, 2021Updated 4 years ago
- Creating virtual environments for R.☆17Oct 24, 2019Updated 6 years ago
- An R package for manipulating phylogentic trees☆11Nov 1, 2020Updated 5 years ago
- Python library for genome editing, CRISPR gRNA design and prediction☆21Dec 2, 2025Updated 9 months ago
- Command line tools for IntSpan related bioinformatics operations☆12Apr 9, 2025Updated last year
- A fast and flexible program to annotate/interpret genetic variants in VCF/BCF file☆22Oct 26, 2020Updated 5 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Simple tool to verticalize text delimited files.☆37May 6, 2024Updated 2 years ago
- Robust individual and aggregate checksums for nucleotide sequences☆18Mar 3, 2026Updated 6 months ago
- Advanced R / Bioconductor training material☆20Mar 15, 2023Updated 3 years ago
- Combine reference and assembled transcriptomes for RNA-Seq analysis☆24Feb 12, 2020Updated 6 years ago
- R interface to GenBank/GenPept files☆14Jan 12, 2021Updated 5 years ago
- A dotplot application for DNA/RNA sequence☆12Nov 28, 2022Updated 3 years ago
- Python programs for processing GFF3 files☆105Jul 29, 2026Updated last month
- New version of mpMap☆12Jul 19, 2020Updated 6 years ago
- ☆10Oct 31, 2022Updated 3 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Integrated toolkit for analysis and evaluation of annotated genomes☆25Aug 1, 2025Updated last year
- Tools for generating and decoding error-correcting DNA barcodes☆15Feb 15, 2022Updated 4 years ago
- GFF/GTF utility providing format conversions, region filtering, FASTA sequence extraction and more☆499Jul 7, 2026Updated 2 months ago
- Efficient C functions to compute the summary statistics (flagstats) for sequencing read sets.☆16Aug 1, 2026Updated last month
- Public repository for the biodata resource inventory performed in 2022.☆11Nov 25, 2025Updated 9 months ago
- BAGEL software☆28Jan 30, 2024Updated 2 years ago
- R boot-camp☆26Nov 9, 2014Updated 11 years ago