datasnakes / renv
Creating virtual environments for R.
☆17Updated 5 years ago
Alternatives and similar repositories for renv:
Users that are interested in renv are comparing it to the libraries listed below
- Elastic, reproducible, and reusable genomic data science tools from R backed by cloud resources☆34Updated 3 years ago
- R scripts for analyzing the 1.3 million brain cell data set from 10X Genomics☆12Updated 2 years ago
- Tutorial for working with cloud infrastructure and AWS from R☆20Updated 7 years ago
- Computable build reports, package metadata, and download stats from the Bioconductor project☆21Updated this week
- SummarizedBenchmark defines a flexible framework for benchmarking computational methods in R.☆15Updated 3 years ago
- Scripts for reproducing analyses of large RNA-seq datasets☆15Updated 5 years ago
- ☆11Updated 6 years ago
- ☆10Updated 3 years ago
- beRi "beri environments for R installations" is an R environment, R installation, and R package management system for R☆14Updated 5 years ago
- LEGACY: Git commands to keep a Git repository and Bioconductor SVN in sync☆10Updated 8 years ago
- A port of the matrixStats API to work with DelayedMatrix objects from the DelayedArray package☆16Updated 2 weeks ago
- ☆18Updated 8 years ago
- SEQprocess: a modularized and customizable pipeline framework for NGS processing in R package☆17Updated 5 years ago
- Helper script for bioconductor/bioconductor_docker☆11Updated last month
- Data exploration with multiple machine learning algorithms☆14Updated 3 years ago
- home of the bear's lair☆10Updated 7 years ago
- logistic factor analysis☆16Updated 3 weeks ago
- Annotation-agnostic differential expression analysis of RNA-seq data via expressed regions-level or single base-level approaches☆43Updated 4 months ago
- R package to quickly obtain count vectors from indexed bam files☆15Updated 3 years ago
- Shape analysis of high-throughput data☆19Updated 9 years ago
- This python package is for transitioning bioconductor from SVN to git☆14Updated 2 years ago
- ☆16Updated 7 years ago
- Reproducible GSEA Benchmarking☆13Updated 2 weeks ago
- iDEP: integrated Differential Expression & Pathway analysis☆15Updated 6 years ago
- Query sequence data (VCF/BCF1/BCF2, Tabix, BGEN, PLINK) in R☆30Updated 7 months ago
- Curated Data From The Cancer Genome Atlas (TCGA) as MultiAssayExperiment Objects☆44Updated 2 weeks ago
- qtools has helper functions to submit jobs to compute clusters (PBS on TSCC, SGE on oolite) from within Python☆21Updated last year
- Seamless navigation through combined results of set-based and network-based enrichment analysis☆20Updated last month
- Interface to 10x Genomics' 1.3 m single cell data set☆18Updated 6 years ago
- Examples of kallisto + sleuth☆11Updated 7 years ago