Alternatives and similar repositories for niffler

Users that are interested in niffler are comparing it to the libraries listed below

• aseyboldt / fastq-rs
  ☆51Updated 2 years ago
• Daniel-Liu-c0deb0t / cute-nucleotides
  Cute tricks for SIMD vectorized binary encoding and decoding of nucleotides, in Rust.
  ☆129Updated 4 years ago
• jguhlin / minimap2-rs
  Rust bindings to minimap2 library
  ☆101Updated 3 weeks ago
• markschl / seq_io
  FASTA and FASTQ parsing in Rust
  ☆79Updated 4 months ago
• TravisWheelerLab / sufr
  Parallel Construction of Suffix Arrays in Rust
  ☆25Updated 3 months ago
• 10XGenomics / rust-toolbox
  Rust utility code
  ☆33Updated last year
• zaeleus / squab
  Alignment-based gene expression quantification
  ☆29Updated 4 months ago
• stjude-rust-labs / omics
  Foundations for the Rust omics ecosystem.
  ☆11Updated 2 weeks ago
• onecodex / finch-rs
  A genomic minhashing implementation in Rust
  ☆99Updated last month
• simonpenel / light_phylogeny
  Light phylogeny library for Rust
  ☆10Updated 3 months ago
• 38 / grass
  ☆22Updated 3 years ago
• ocxtal / udon
  BAM CIGAR / MD transcoder for compact on-memory representation and quick drawing
  ☆21Updated 2 years ago
• jeanmanguy / spideog
  🐦 spideog - Command line utility for Kraken2 reports.
  ☆12Updated 4 years ago
• COMBINE-lab / kmers
  A bit-packed k-mer representation (and relevant utilities) for rust
  ☆48Updated last year
• anp / parasailors
  Rust bindings to parasail, a SIMD-accelerated pairwise sequence alignment library.
  ☆22Updated 9 years ago
• dcjones / coitrees
  A very fast interval tree data structure
  ☆123Updated 6 months ago
• sstadick / rust-lapper
  Rust implementation of a fast, easy, interval tree library nim-lapper
  ☆63Updated last month
• ostnam / rust-wfa
  ☆11Updated 3 years ago
• jltsiren / simple-sds
  Simple succinct data structures (in Rust)
  ☆51Updated 8 months ago
• COMBINE-lab / terminus
  ☆58Updated 2 years ago
• informationsea / bgzip-rs
  bgzip support for Rust
  ☆16Updated last year
• luizirber / nthash
  ntHash implementation in Rust
  ☆36Updated last year
• umccr / htsget-rs
  A server implementation of the htsget protocol for bioinformatics in Rust
  ☆45Updated this week
• informationsea / vcf-rs
  Rust implmentation of VCF parser
  ☆25Updated 2 years ago
• stjude-rust-labs / sprocket
  A bioinformatics workflow engine built on top of the Workflow Description Language (WDL).
  ☆84Updated this week
• 38 / d4-format
  The D4 Quantitative Data Format
  ☆166Updated 3 months ago
• RagnarGrootKoerkamp / sassy
  Fast approximate string searching
  ☆46Updated last week
• RagnarGrootKoerkamp / rust-phylogeny
  Rust package for constructing and analyzing phylogenies.
  ☆15Updated 3 months ago
• rchikhi / rust-alignbench
  Pairwise nucleotide alignment benchmark of Rust bindings
  ☆31Updated 2 years ago
• onecodex / needletail
  Fast FASTX parsing and k-mer methods in Rust
  ☆195Updated 2 weeks ago