informationsea / bgzip-rs
bgzip support for Rust
☆16Updated last year
Alternatives and similar repositories for bgzip-rs
Users that are interested in bgzip-rs are comparing it to the libraries listed below
Sorting:
- Fast and flexible tool for reading, modifying and writing biological sequences☆17Updated last week
- Alignment-based gene expression quantification☆27Updated last month
- Rust implmentation of VCF parser☆23Updated 2 years ago
- Efficient querying of biological databases☆36Updated last week
- Rust utility code☆33Updated last year
- BAM CIGAR / MD transcoder for compact on-memory representation and quick drawing☆20Updated last year
- Rust bindings to minimap2 library☆95Updated last week
- ☆21Updated 2 years ago
- Pairwise nucleotide alignment benchmark of Rust bindings☆31Updated last year
- A library of common biomedical types.☆37Updated last month
- Tools for working FASTQ files from sequencers (R1/R2/I1/I2)☆13Updated 5 months ago
- A Rust library for parsing, writing and manipulating Genbank sequence files☆17Updated 3 weeks ago
- A bit-packed k-mer representation (and relevant utilities) for rust☆48Updated 10 months ago
- Wrapper over rust-htslib for building collections of BAM records for testing.☆11Updated last year
- Command line tools for IntSpan related bioinformatics operations☆13Updated last month
- Toolkit for manipulating FASTA and SAM files☆18Updated last year
- Make phylogenetic trees and lineages from the NCBI Taxonomy database☆13Updated 2 years ago
- A (very) fast program for getting statistics about a fastq file, the way I need them, written in Rust☆30Updated 3 months ago
- ☆11Updated 2 years ago
- ☆22Updated 5 months ago
- Parallel Construction of Suffix Arrays in Rust☆23Updated last week
- Iterate over minimizers of a DNA sequence☆29Updated 10 months ago
- Fast interval intersection library☆40Updated 2 months ago
- Simple and transparent support for compressed files.☆76Updated 3 months ago
- A rust wrapper for the spoa C++ partial order alignment library☆10Updated 10 months ago
- Bioinformatics 101 tool for counting unique k-length substrings in DNA☆30Updated last year
- Rust package for constructing and analyzing phylogenies.☆15Updated last week
- Rust UMI Directional Adjacency Deduplicator☆15Updated 5 years ago
- A Go implementation of the strobemers (https://github.com/ksahlin/strobemers)☆15Updated 4 years ago
- FASTA and FASTQ parsing in Rust☆77Updated last month