Alternatives and similar repositories for bgzip-rs

Users that are interested in bgzip-rs are comparing it to the libraries listed below

• 10XGenomics / fastq_set
  Tools for working FASTQ files from sequencers (R1/R2/I1/I2)
  ☆13Updated 8 months ago
• zaeleus / squab
  Alignment-based gene expression quantification
  ☆29Updated 4 months ago
• noamteyssier / ggetrs
  Efficient querying of biological databases
  ☆40Updated 3 weeks ago
• ostnam / rust-wfa
  ☆11Updated 3 years ago
• nh13 / fqme
  ☆22Updated 8 months ago
• kcleal / superintervals
  Fast interval intersection library
  ☆43Updated last week
• informationsea / vcf-rs
  Rust implmentation of VCF parser
  ☆25Updated 2 years ago
• stjude-rust-labs / ngs
  Command line utility for working with next-generation sequencing files.
  ☆36Updated 2 months ago
• Daniel-Liu-c0deb0t / ANTISEQUENCE
  Rust library for processing sequencing reads.
  ☆25Updated 11 months ago
• noamteyssier / gia
  gia: Genomic Interval Arithmetic
  ☆65Updated last year
• sstadick / bam-builder
  Wrapper over rust-htslib for building collections of BAM records for testing.
  ☆11Updated last year
• vsbuffalo / genomap
  A Rust library for storing generic genomic data by sorted chromosome name
  ☆17Updated 11 months ago
• varfish-org / mehari
  VEP-like tool for sequence ontology and HGVS annotation of VCF files
  ☆21Updated last week
• noamteyssier / paraseq
  A minimal copy fastq and fasta reader built for parallel support and paired end processing
  ☆21Updated 3 weeks ago
• angelovangel / faster
  A (very) fast program for getting statistics about a fastq file, the way I need them, written in Rust
  ☆32Updated 7 months ago
• ekg / pca
  PCA in rust
  ☆15Updated 2 years ago
• sstadick / rumi
  Rust UMI Directional Adjacency Deduplicator
  ☆15Updated 5 years ago
• nlhepler / spoa-rs
  A rust wrapper for the spoa C++ partial order alignment library
  ☆10Updated 2 months ago
• natir / vcf2parquet
  Convert vcf in parquet
  ☆27Updated 7 months ago
• Singular-Genomics / singular-demux
  Singular Genomics Demultiplexing Tool
  ☆16Updated last year
• Ebedthan / sabreur
  fast, reliable and handy demultiplexing tool for fastx files
  ☆14Updated 3 weeks ago
• COMBINE-lab / kmers
  A bit-packed k-mer representation (and relevant utilities) for rust
  ☆48Updated last year
• BUStools / BUS-format
  BUS format specification
  ☆14Updated 5 years ago
• COMBINE-lab / piscem
  Rust wrapper for the next generation (still currently in C++)
  ☆28Updated last month
• markschl / seqtool
  Fast and flexible tool for reading, modifying and writing biological sequences
  ☆18Updated last month
• RagnarGrootKoerkamp / sassy
  Fast approximate string searching
  ☆50Updated last month
• 38 / pyd4
  The python binding for D4 format
  ☆16Updated 3 years ago
• annalam / seqkit
  Toolkit for manipulating FASTA and SAM files
  ☆19Updated last year
• markschl / seq_io
  FASTA and FASTQ parsing in Rust
  ☆79Updated 5 months ago
• ArcInstitute / mmr
  A minimap2 implementation with binseq inputs
  ☆16Updated 3 weeks ago