COMBINE-lab / terminusLinks
☆58Updated 2 years ago
Alternatives and similar repositories for terminus
Users that are interested in terminus are comparing it to the libraries listed below
Sorting:
- an API for intersections of genomic data☆75Updated this week
- A high-performance BigWig and BigBed library in Rust☆92Updated 3 weeks ago
- Alignment-based gene expression quantification☆28Updated 2 months ago
- gia: Genomic Interval Arithmetic☆65Updated 10 months ago
- expressions on VCFs☆85Updated 2 months ago
- A bit-packed k-mer representation (and relevant utilities) for rust☆48Updated last year
- ☆21Updated 5 months ago
- ☆48Updated 2 years ago
- a lexicographically-based GTF/GFF sorter☆35Updated last month
- Fast FASTQ sample demultiplexing in Rust.☆62Updated last month
- Rust wrapper for the next generation (still currently in C++)☆26Updated 3 weeks ago
- Per-base per-nucleotide depth analysis☆131Updated 5 months ago
- Single-cell analysis methods in Rust☆22Updated last week
- An efficient CLI to extract sequences from the SRA☆105Updated 3 weeks ago
- long read RNA-seq quantification☆86Updated last week
- overlapping bases in read-pairs from a fragment indicate accuracy and reveal error-prone sites☆33Updated 2 weeks ago
- Command line utility for manipulating Illumina-generated FASTQ files.☆87Updated 3 months ago
- A Rust library and command line tool for working with genomic ranges and their data.☆101Updated last year
- Snakemake pipeline for benchmarking read mappers☆16Updated last year
- Grep for FASTQ files☆97Updated 2 months ago
- Creating alignment plots from bam files☆65Updated last week
- Single-Cell RNA-seq pseudo-aligner☆51Updated last year
- FASTA and FASTQ parsing in Rust☆79Updated 3 months ago
- Long-read splice alignment with high accuracy☆63Updated 9 months ago
- A VSCode extension pack for nf-core developers.☆15Updated 3 months ago
- Tools for working FASTQ files from sequencers (R1/R2/I1/I2)☆13Updated 6 months ago
- curPrimers is a tool for trimming primer sequences from amplicon based NGS reads☆16Updated last month
- vembrane filters VCF records using python expressions☆59Updated last week
- Bam Error Stats Tool (best): analysis of error types in aligned reads.☆132Updated 4 months ago
- An R package for estimating poly(A)-tail lengths in Oxford Nanopore RNA and DNA reads.☆53Updated 8 months ago