COMBINE-lab / terminus
☆58Updated 2 years ago
Alternatives and similar repositories for terminus:
Users that are interested in terminus are comparing it to the libraries listed below
- an API for intersections of genomic data☆75Updated last week
- A high-performance BigWig and BigBed library in Rust☆79Updated 3 weeks ago
- A Rust library and command line tool for working with genomic ranges and their data.☆102Updated 10 months ago
- A bit-packed k-mer representation (and relevant utilities) for rust☆48Updated 9 months ago
- Fast FASTQ sample demultiplexing in Rust.☆60Updated last week
- Alignment-based gene expression quantification☆27Updated last month
- gia: Genomic Interval Arithmetic☆61Updated 7 months ago
- Single-cell analysis methods in Rust☆21Updated 4 months ago
- expressions on VCFs☆79Updated last month
- Grep for FASTQ files☆96Updated last week
- long read RNA-seq quantification☆79Updated this week
- Tools for working FASTQ files from sequencers (R1/R2/I1/I2)☆13Updated 3 months ago
- a lexicographically-based GTF/GFF sorter☆33Updated 7 months ago
- Command line utility for manipulating Illumina-generated FASTQ files.☆83Updated last month
- Rust wrapper for the next generation (still currently in C++)☆24Updated last month
- De Bruijn graphs in Rust☆66Updated 8 months ago
- simple bioinformatics command-line (t)ools (i) (w)ished (i) (h)ad.☆44Updated 2 years ago
- Per-base per-nucleotide depth analysis☆126Updated 2 months ago
- bedtools-like functionality for interval sets in rust☆50Updated 7 months ago
- A better, faster way to count guides in CRISPR screens.☆31Updated last week
- Single-Cell RNA-seq pseudo-aligner☆51Updated 10 months ago
- curPrimers is a tool for trimming primer sequences from amplicon based NGS reads☆17Updated 5 years ago
- FASTA and FASTQ parsing in Rust☆75Updated 2 weeks ago
- Simple utility to concatenate .fastq(.gz) files whilst creating a summary of the sequences.☆35Updated this week
- Ultraperformant reimplementation of SICER☆56Updated 3 years ago
- Flexible and efficient parsing, interpreting and editing of sequencing reads☆42Updated 2 months ago
- Creating alignment plots from bam files☆56Updated this week
- ☆45Updated 2 years ago
- bioinformatics toolkit in rust☆87Updated 10 months ago
- Bam Error Stats Tool (best): analysis of error types in aligned reads.☆129Updated last month