COMBINE-lab / terminusLinks
☆58Updated 2 years ago
Alternatives and similar repositories for terminus
Users that are interested in terminus are comparing it to the libraries listed below
Sorting:
- Alignment-based gene expression quantification☆28Updated last month
- A high-performance BigWig and BigBed library in Rust☆90Updated last week
- an API for intersections of genomic data☆75Updated this week
- A bit-packed k-mer representation (and relevant utilities) for rust☆48Updated 11 months ago
- gia: Genomic Interval Arithmetic☆62Updated 9 months ago
- expressions on VCFs☆85Updated last month
- Rust wrapper for the next generation (still currently in C++)☆25Updated this week
- Fast FASTQ sample demultiplexing in Rust.☆62Updated last week
- A Rust library and command line tool for working with genomic ranges and their data.☆101Updated last year
- overlapping bases in read-pairs from a fragment indicate accuracy and reveal error-prone sites☆33Updated this week
- bioinformatics toolkit in rust☆89Updated this week
- a lexicographically-based GTF/GFF sorter☆34Updated last month
- ☆21Updated 5 months ago
- FASTA and FASTQ parsing in Rust☆77Updated 2 months ago
- An efficient CLI to extract sequences from the SRA☆101Updated this week
- De Bruijn graphs in Rust☆69Updated 10 months ago
- Tools for working FASTQ files from sequencers (R1/R2/I1/I2)☆13Updated 6 months ago
- long read RNA-seq quantification☆85Updated last month
- Creating alignment plots from bam files☆65Updated this week
- Per-base per-nucleotide depth analysis☆129Updated 4 months ago
- Fasten toolkit, for streaming operations on fastq files☆79Updated last month
- Single-cell analysis methods in Rust☆22Updated 6 months ago
- Grep for FASTQ files☆97Updated last month
- vembrane filters VCF records using python expressions☆58Updated this week
- curPrimers is a tool for trimming primer sequences from amplicon based NGS reads☆16Updated last week
- Long-read splice alignment with high accuracy☆63Updated 8 months ago
- Single-Cell RNA-seq pseudo-aligner☆51Updated last year
- ☆47Updated 2 years ago
- Flexible, uncertainty-aware variant calling with parameter free filtration via FDR control.☆126Updated this week
- bedtools-like functionality for interval sets in rust☆52Updated 9 months ago