Alternatives and similar repositories for parasailors

Users that are interested in parasailors are comparing it to the libraries listed below

• luizirber / niffler
  Simple and transparent support for compressed files.
  ☆81Updated 9 months ago
• Daniel-Liu-c0deb0t / cute-nucleotides
  Cute tricks for SIMD vectorized binary encoding and decoding of nucleotides, in Rust.
  ☆129Updated 4 years ago
• 10XGenomics / rust-toolbox
  Rust utility code
  ☆32Updated last year
• onecodex / finch-rs
  A genomic minhashing implementation in Rust
  ☆101Updated 5 months ago
• jeanmanguy / spideog
  🐦 spideog - Command line utility for Kraken2 reports.
  ☆11Updated 5 years ago
• lukaslueg / hyperminhash
  ☆15Updated last week
• TravisWheelerLab / sufr
  Parallel Construction of Suffix Arrays in Rust
  ☆26Updated 6 months ago
• simonpenel / light_phylogeny
  Light phylogeny library for Rust
  ☆10Updated last month
• zaeleus / squab
  Alignment-based gene expression quantification
  ☆30Updated 3 months ago
• jltsiren / simple-sds
  Simple succinct data structures (in Rust)
  ☆51Updated last year
• 38 / grass
  ☆22Updated 3 years ago
• ocxtal / udon
  BAM CIGAR / MD transcoder for compact on-memory representation and quick drawing
  ☆20Updated 2 years ago
• stjude-rust-labs / omics
  Foundations for the Rust omics ecosystem.
  ☆12Updated last month
• 10XGenomics / rust-shardio
  Out-of-memory sorting of large datasets map / reduce style processing
  ☆46Updated 2 months ago
• RagnarGrootKoerkamp / rust-phylogeny
  Rust package for constructing and analyzing phylogenies. (unpolished & unmaintained)
  ☆15Updated 6 months ago
• RagnarGrootKoerkamp / simd-sketch
  Compute bottom-s sketches and s-buckets sketches, using simd-minimizers crate.
  ☆20Updated last month
• aseyboldt / fastq-rs
  ☆50Updated 3 years ago
• sstadick / rust-lapper
  Rust implementation of a fast, easy, interval tree library nim-lapper
  ☆67Updated 4 months ago
• COMBINE-lab / kmers
  A bit-packed k-mer representation (and relevant utilities) for rust
  ☆47Updated last year
• luizirber / nthash
  ntHash implementation in Rust
  ☆36Updated last year
• tov / succinct-rs
  Succinct Data Structures for Rust
  ☆58Updated 5 months ago
• Daniel-Liu-c0deb0t / simple-saca
  Hardware go brrr bounded context suffix array construction algorithm
  ☆19Updated 2 years ago
• dcjones / coitrees
  A very fast interval tree data structure
  ☆124Updated 9 months ago
• COMBINE-lab / terminus
  ☆57Updated 3 years ago
• suchapalaver / krust
  Bioinformatics 101 tool for counting unique k-length substrings in DNA
  ☆32Updated 2 years ago
• markschl / seq_io
  FASTA and FASTQ parsing in Rust
  ☆79Updated 8 months ago
• 10XGenomics / rust-boomphf
  Fast and scalable minimal perfect hashing for massive key sets
  ☆146Updated last year
• noamteyssier / ggetrs
  Efficient querying of biological databases
  ☆42Updated last month
• 10XGenomics / rust-debruijn
  De Bruijn graphs in Rust
  ☆71Updated last year
• jperkel / gb_read
  An example GenBank file reader in Rust
  ☆36Updated 4 years ago