Alternatives and similar repositories for parasailors:

Users that are interested in parasailors are comparing it to the libraries listed below

• wafflespeanut / nucleic-acid
  BWT, FM-index and bits vector for analyzing DNA sequence data.
  ☆17Updated 7 years ago
• luizirber / niffler
  Simple and transparent support for compressed files.
  ☆76Updated 7 months ago
• 10XGenomics / rust-toolbox
  Rust utility code
  ☆32Updated 11 months ago
• onecodex / finch-rs
  A genomic minhashing implementation in Rust
  ☆93Updated last year
• markschl / seqtool
  Fast and flexible tool for reading, modifying and writing biological sequences
  ☆17Updated last week
• informationsea / bgzip-rs
  bgzip support for Rust
  ☆16Updated last year
• zaeleus / squab
  Alignment-based gene expression quantification
  ☆27Updated 7 months ago
• rust-bio / rust-bio-types
  A library of common biomedical types.
  ☆37Updated 2 months ago
• 10XGenomics / rust-shardio
  Out-of-memory sorting of large datasets map / reduce style processing
  ☆47Updated last week
• aseyboldt / fastq-rs
  ☆50Updated 2 years ago
• informationsea / vcf-rs
  Rust implmentation of VCF parser
  ☆22Updated 2 years ago
• 10XGenomics / rust-debruijn
  De Bruijn graphs in Rust
  ☆65Updated 5 months ago
• jltsiren / simple-sds
  Simple succinct data structures (in Rust)
  ☆50Updated last month
• Daniel-Liu-c0deb0t / cute-nucleotides
  Cute tricks for SIMD vectorized binary encoding and decoding of nucleotides, in Rust.
  ☆116Updated 4 years ago
• Daniel-Liu-c0deb0t / simple-saca
  Hardware go brrr bounded context suffix array construction algorithm
  ☆17Updated last year
• markschl / seq_io
  FASTA and FASTQ parsing in Rust
  ☆73Updated last year
• jguhlin / minimap2-rs
  Rust bindings to minimap2 library
  ☆87Updated last week
• 38 / grass
  ☆21Updated 2 years ago
• jeanmanguy / spideog
  🐦 spideog - Command line utility for Kraken2 reports.
  ☆12Updated 4 years ago
• ocxtal / udon
  BAM CIGAR / MD transcoder for compact on-memory representation and quick drawing
  ☆20Updated last year
• RagnarGrootKoerkamp / rust-phylogeny
  Rust package for constructing and analyzing phylogenies.
  ☆15Updated 3 years ago
• luizirber / nthash
  ntHash implementation in Rust
  ☆35Updated 6 months ago
• TianyiShi2001 / bioinformatics-algorithms-rs
  Bioinformatics Algorithms implemented in Rust for Learners
  ☆30Updated 3 years ago
• rchikhi / rust-alignbench
  Pairwise nucleotide alignment benchmark of Rust bindings
  ☆31Updated last year
• RagnarGrootKoerkamp / PtrHash
  PTRHash minimal perfect hash function, based of PTHash
  ☆39Updated last month
• 10XGenomics / rust-boomphf
  Fast and scalable minimal perfect hashing for massive key sets
  ☆138Updated 6 months ago
• suchapalaver / krust
  Bioinformatics 101 tool for counting unique k-length substrings in DNA
  ☆30Updated last year
• tov / succinct-rs
  Succinct Data Structures for Rust
  ☆56Updated last year
• CarlKCarlK / range-set-blaze
  Integer sets as fast, sorted, integer ranges with full set operations
  ☆79Updated 3 weeks ago
• samuell / gccontent-benchmark
  Benchmarking different languages for a simple bioinformatics task (Counting the GC fraction of DNA in a FASTA file)
  ☆57Updated last year