anp / parasailors
Rust bindings to parasail, a SIMD-accelerated pairwise sequence alignment library.
☆22Updated 8 years ago
Alternatives and similar repositories for parasailors:
Users that are interested in parasailors are comparing it to the libraries listed below
- Simple and transparent support for compressed files.☆76Updated last month
- Rust utility code☆32Updated last year
- Alignment-based gene expression quantification☆27Updated last month
- ntHash implementation in Rust☆35Updated 8 months ago
- BWT, FM-index and bits vector for analyzing DNA sequence data.☆17Updated 7 years ago
- Rust package for constructing and analyzing phylogenies.☆15Updated 3 years ago
- A library of common biomedical types.☆38Updated 3 weeks ago
- ☆51Updated 2 years ago
- Parallel Construction of Suffix Arrays in Rust☆23Updated this week
- Bioinformatics 101 tool for counting unique k-length substrings in DNA☆30Updated last year
- Rust in bioinformatics and computational biology☆20Updated 2 years ago
- Light phylogeny API for Rust☆9Updated last month
- BAM CIGAR / MD transcoder for compact on-memory representation and quick drawing☆20Updated last year
- Pairwise nucleotide alignment benchmark of Rust bindings☆31Updated last year
- ☆21Updated 2 years ago
- A bit-packed k-mer representation (and relevant utilities) for rust☆48Updated 9 months ago
- Fast and flexible tool for reading, modifying and writing biological sequences☆17Updated 2 months ago
- A genomic minhashing implementation in Rust☆93Updated last year
- bgzip support for Rust☆16Updated last year
- 🐦 spideog - Command line utility for Kraken2 reports.☆12Updated 4 years ago
- Simple succinct data structures (in Rust)☆50Updated 4 months ago
- FASTA and FASTQ parsing in Rust☆75Updated 2 weeks ago
- A Rust library for parsing, writing and manipulating Genbank sequence files☆17Updated 3 weeks ago
- De Bruijn graphs in Rust☆66Updated 8 months ago
- Rust bindings to minimap2 library☆92Updated 2 months ago
- ☆58Updated 2 years ago
- A rust wrapper for the spoa C++ partial order alignment library☆10Updated 8 months ago
- Universal K-mer Hitting Set library in Rust☆10Updated 4 years ago
- Rust implmentation of VCF parser☆23Updated 2 years ago
- ☆14Updated 4 years ago