Rust implementation of a fast, easy, interval tree library nim-lapper
☆71Aug 20, 2026Updated 2 months ago
Alternatives and similar repositories for rust-lapper
Users that are interested in rust-lapper are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A very fast interval tree data structure☆137Feb 3, 2025Updated last year
- Bioinformatics I/O libraries in Rust☆729Oct 15, 2026Updated 2 weeks ago
- Rust bindings to minimap2 library☆114Sep 14, 2026Updated last month
- Fast interval intersection library☆44Updated this week
- SIMD-accelerated library for computing global and X-drop affine gap penalty sequence-to-sequence or sequence-to-profile alignments using …☆141Jun 23, 2024Updated 2 years ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- Fast FASTX parsing and k-mer methods in Rust☆214Oct 6, 2026Updated 3 weeks ago
- ☆15Nov 30, 2023Updated 2 years ago
- bedtools-like functionality for interval sets in rust☆56Aug 5, 2025Updated last year
- The D4 Quantitative Data Format☆176Nov 28, 2025Updated 11 months ago
- ☆22Jul 28, 2022Updated 4 years ago
- Simple and transparent support for compressed files.☆81Sep 23, 2026Updated last month
- Command line tools for IntSpan related bioinformatics operations☆12Apr 9, 2025Updated last year
- fast easy interval overlapping for nim-lang☆30Jul 9, 2025Updated last year
- This library provides HTSlib bindings and a high level Rust API for reading and writing BAM files.☆376Aug 17, 2026Updated 2 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- A high-performance BigWig and BigBed library in Rust☆128Aug 14, 2026Updated 2 months ago
- Per-base per-nucleotide depth analysis☆153Updated this week
- ntHash implementation in Rust☆36Jul 12, 2024Updated 2 years ago
- A pairwise sequence aligner written in Rust☆152May 22, 2026Updated 5 months ago
- just get your chrom sizes☆17Mar 17, 2026Updated 7 months ago
- A set of command line utilities based on Rust-Bio.☆205Jun 24, 2024Updated 2 years ago
- SQL dialect for genomic range operations☆10Sep 14, 2026Updated last month
- BAM/SAM/CRAM/FASTA reader, pileup engine, BCF/BAM writing☆31Updated this week
- A Rust library and command line tool for working with genomic ranges and their data.☆103May 29, 2024Updated 2 years ago
- Open source password manager - Proton Pass • AdSecurely store, share, and autofill your credentials with Proton Pass, the end-to-end encrypted password manager trusted by millions.
- ☆19Jul 15, 2026Updated 3 months ago
- Reference implementations of minimizer schemes to go with the mod-minimizers paper.☆29Jul 12, 2026Updated 3 months ago
- The python binding for D4 format☆16Oct 22, 2021Updated 5 years ago
- an API for intersections of genomic data☆150Oct 4, 2026Updated 3 weeks ago
- Code for blog post "{n} times faster than C, where n = 128"☆11Jul 20, 2023Updated 3 years ago
- A long read simulator based on badread idea☆23Oct 7, 2022Updated 4 years ago
- Bonsai: Fast, flexible taxonomic analysis and classification☆69Oct 23, 2026Updated last week
- A Rust data structure for efficient lower-bound lookups☆93Feb 26, 2024Updated 2 years ago
- Rust library for processing sequencing reads.☆25Sep 2, 2024Updated 2 years ago
- End-to-end encrypted email - Proton Mail • AdSpecial offer: 40% Off Yearly / 80% Off First Month. All Proton services are open source and independently audited for security.
- Interval Tree In Rust☆22Oct 22, 2022Updated 4 years ago
- Randomly subsample sequencing reads or alignments☆279Oct 19, 2026Updated 2 weeks ago
- Experimental getopt, gzip reader, FASTA/Q parser and interval queries in nim-lang☆31Apr 20, 2020Updated 6 years ago
- Real-time species-typing visualisation for nanopore data.☆12Apr 11, 2023Updated 3 years ago
- Calculation of euclidean distance between vectors, with SIMD☆13Jan 17, 2024Updated 2 years ago
- using all the bits for echt rapid variant annotation and filtering☆166Jul 22, 2026Updated 3 months ago
- A decoder that automatically detects compression format (gzip, bzip2, xz, zstd) via external crates. Includes encoder as well.☆13Jan 8, 2026Updated 9 months ago