Alternatives and similar repositories for rust-lapper

Users that are interested in rust-lapper are comparing it to the libraries listed below

• 10XGenomics / rust-boomphf
  Fast and scalable minimal perfect hashing for massive key sets
  ☆141Updated last year
• luizirber / niffler
  Simple and transparent support for compressed files.
  ☆80Updated 6 months ago
• Daniel-Liu-c0deb0t / cute-nucleotides
  Cute tricks for SIMD vectorized binary encoding and decoding of nucleotides, in Rust.
  ☆129Updated 4 years ago
• dcjones / coitrees
  A very fast interval tree data structure
  ☆126Updated 6 months ago
• main-- / rust-intervaltree
  ☆21Updated last year
• Daniel-Liu-c0deb0t / triple_accel
  Rust edit distance routines accelerated using SIMD. Supports fast Hamming, Levenshtein, restricted Damerau-Levenshtein, etc. distance cal…
  ☆109Updated 2 years ago
• sstadick / gzp
  Multi-threaded Compression
  ☆165Updated 4 months ago
• RagnarGrootKoerkamp / PtrHash
  PtrHash minimal perfect hash function
  ☆66Updated last month
• anp / parasailors
  Rust bindings to parasail, a SIMD-accelerated pairwise sequence alignment library.
  ☆22Updated 9 years ago
• 10XGenomics / rust-toolbox
  Rust utility code
  ☆33Updated last year
• CarlKCarlK / range-set-blaze
  Integer sets as fast, sorted, integer ranges with full set operations
  ☆91Updated 2 weeks ago
• jltsiren / simple-sds
  Simple succinct data structures (in Rust)
  ☆51Updated 9 months ago
• lukaslueg / hyperminhash
  ☆14Updated last year
• 38 / grass
  ☆22Updated 3 years ago
• aseyboldt / fastq-rs
  ☆51Updated 2 years ago
• ostnam / rust-wfa
  ☆11Updated 3 years ago
• mrkline / piz-rs
  Parallelized zip archive reading
  ☆37Updated 8 months ago
• umccr / htsget-rs
  A server implementation of the htsget protocol for bioinformatics in Rust
  ☆45Updated last week
• diffeo / kodama
  Fast hierarchical agglomerative clustering in Rust.
  ☆103Updated 4 months ago
• 10XGenomics / rust-shardio
  Out-of-memory sorting of large datasets map / reduce style processing
  ☆47Updated 3 weeks ago
• TravisWheelerLab / sufr
  Parallel Construction of Suffix Arrays in Rust
  ☆26Updated 3 months ago
• markschl / seq_io
  FASTA and FASTQ parsing in Rust
  ☆79Updated 5 months ago
• stjude-rust-labs / omics
  Foundations for the Rust omics ecosystem.
  ☆11Updated last month
• jguhlin / minimap2-rs
  Rust bindings to minimap2 library
  ☆101Updated last week
• frjnn / bhtsne
  Parallel Barnes-Hut t-SNE implementation written in Rust.
  ☆88Updated last month
• fastlmm / bed-reader
  A library for easy, fast, and efficient reading & writing of PLINK Bed files
  ☆80Updated 5 months ago
• ocxtal / udon
  BAM CIGAR / MD transcoder for compact on-memory representation and quick drawing
  ☆21Updated 2 years ago
• RagnarGrootKoerkamp / sassy
  Fast approximate string searching
  ☆50Updated last month
• sdsl-rs / sdsl-rs
  A Rust interface for the Succinct Data Structure Library.
  ☆14Updated 3 years ago
• zaeleus / squab
  Alignment-based gene expression quantification
  ☆29Updated 4 months ago