mabr3112 / ProtFlowLinks
A Python package to manage protein design workflows on computing clusters and local machines. Documentation can be found here: https://protflow.readthedocs.io/en/latest/
☆34Updated this week
Alternatives and similar repositories for ProtFlow
Users that are interested in ProtFlow are comparing it to the libraries listed below
Sorting:
- ☆21Updated last year
- Metrics for our protein design competitions.☆35Updated last year
- AbEpiTope-1.0 is a computational tool that features two scores: AbEpiScore-1.0, designed for assessing the accuracy of modelled AbAg inte…☆28Updated 3 months ago
- Generative diverse protein backbones by protein language model☆34Updated 2 months ago
- Physical energy function for protein sequence design☆36Updated 2 years ago
- Template-based protein design with Raygun☆76Updated last week
- ☆21Updated last year
- Controlling the usage of hydrophobic residues on AfDesign for binder peptide design with AlphaFold hallucination protocol☆33Updated 2 years ago
- ☆72Updated 10 months ago
- Efficient manipulation of protein structures in Python☆61Updated 3 months ago
- ProteusAI is a library for the machine learning driven engineering of proteins. The library enables workflows from protein structure pred…☆66Updated 4 months ago
- ☆47Updated last year
- Code for designing binders to flexible peptides with AlphaFold2 Hallucination☆28Updated 2 years ago
- A Memetic Algorithm boosts accuracy and speed of all-atom protein-protein docking☆29Updated 6 months ago
- Identifying peptide-receptor interactions using AlphaFold-Multimer☆27Updated 2 years ago
- Humanness of de-novo designed proteins☆36Updated 8 months ago
- ☆22Updated 2 months ago
- Parametric Building of de novo Functional Topologies☆44Updated 3 years ago
- ☆39Updated last year
- One protein is all you need☆64Updated last month
- The official repository for TherML - a machine learning approach to predict scFv and antibody thermostability☆14Updated 2 years ago
- The software system of improving AlphaFold2- and AlphaFold-Multimer-based protein tertiary & quaternary structure prediction. It was deve…☆33Updated 2 years ago
- ☆47Updated last year
- A bundle of deep-learning packages for biomolecular structure prediction and design contributed to the Rosetta Commons☆37Updated 3 years ago
- Consolidated repository to perform RLXF☆36Updated last week
- Mutational Effect Transfer Learning (METL) framework for pretraining and finetuning biophysics-informed protein language models☆60Updated 2 months ago
- Code for deep learning guided design of dynamic proteins☆32Updated last year
- Fragment binding prediction with ColabFold☆41Updated 2 months ago
- ☆13Updated 8 months ago
- Some scripts that I keep using over and over.☆21Updated 6 months ago