Alternatives and similar repositories for Rosetta-Enzyme-Design-Pipeline

Users that are interested in Rosetta-Enzyme-Design-Pipeline are comparing it to the libraries listed below

• Hoecker-Lab / pocketoptimizer
  Binding pocket optimization based on force fields and docking scoring functions
  ☆36Updated 7 months ago
• masoudk / AsiteDesign
  ☆13Updated 2 years ago
• LongxingCao / pymol_scripts
  bakerlab pymol scripts
  ☆25Updated 5 years ago
• anirudhvenk / antibody-dpo
  ☆25Updated 5 months ago
• Zhang-Runze / PackDock
  PackDock: a Diffusion Based Side Chain Packing Model for Flexible Protein-Ligand Docking
  ☆35Updated 3 weeks ago
• ELELAB / PDBminer
  scripts to find PBD structures for cancer driver proteins
  ☆31Updated last month
• lauramarie99 / ProtDesign2
  ProteinDesign with RFdiffusion and ProteinMPNN/LigandMPNN
  ☆22Updated 8 months ago
• bunzela / AIzymes
  ☆60Updated 3 weeks ago
• GilbertoPPereira / PROTACability
  ☆12Updated 2 years ago
• ohuelab / ColabDesign-cyclic-binder
  ☆36Updated 2 years ago
• sbhakat / AF-cryptic-pocket
  Cryptic pocket prediction using AlphaFold 2
  ☆24Updated 2 years ago
• polizzilab / NISE
  Neural Iterative Selection-Expansion using LASErMPNN and Boltz-2x
  ☆28Updated last month
• darrenjhsu / tiny_IFD
  Lightweight induced fit docking
  ☆21Updated 2 years ago
• KhondamirRustamov / FoldCraft
  ☆42Updated 3 months ago
• mabr3112 / riff_diff_protflow
  ProtFlow Implementation of the RiffDiff pipeline to design enzymes from theozymes.
  ☆37Updated this week
• Ryan-Hu-Hu-Hu / GRACE
  GRACE: Generative Renaissance in Artificial Computational Enzyme Design
  ☆19Updated 10 months ago
• MolecularAI / PepINVENT
  ☆53Updated 7 months ago
• KULL-Centre / AF2chi
  ☆18Updated 3 months ago
• ohuelab / ColabFold-cycpep-dock
  Making Protein folding accessible to all!
  ☆24Updated last year
• ld139 / ApoDock_public
  Code for ApoDock
  ☆21Updated 7 months ago
• wallnerlab / AFsample2
  Modelling protein conformational landscape with Alphafold
  ☆54Updated 2 months ago
• Junjie-Zhu / IDPFold
  Precise Generation of Conformational Ensembles for Intrinsically Disordered Proteins with IDPFold
  ☆24Updated last year
• tiwarylab / af2rave
  Boltzmann-ranked alternative protein conformations from reduced-MSA AlphaFold2
  ☆59Updated last month
• Gonglab-THU / GDFold2
  ☆17Updated 10 months ago
• polizzilab / LASErMPNN
  All-Atom (Including Hydrogen!) Ligand-Conditioned Protein Sequence Design & Sidechain Packing Model
  ☆24Updated last month
• Zuricho / AlphaFold3_Result_Visualize
  A convinent tool to visualize AlphaFold 3 prediction results with PyMOL and matplotlib
  ☆20Updated last year
• ComputArtCMCG / ProBID-NET
  ☆14Updated 5 months ago
• Kuhlman-Lab / ThermoMPNN-D
  Extension of ThermoMPNN for double mutant predictions
  ☆46Updated last month
• giaguaro / PROTACable
  PROTACable is an end-to-end in-silico design toolkit for novel PROTACs
  ☆29Updated last year
• davidekim / parametric_barrels
  Utility scripts to generate and evaluate parametrically guided beta barrel protein backbone structures.
  ☆13Updated 2 weeks ago