Predicting the effect of mutations on protein stability using a simple orientational potential.
☆19Jul 5, 2024Updated last year
Alternatives and similar repositories for korpm
Users that are interested in korpm are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- predict stability change upon mutation☆30Jun 28, 2024Updated last year
- ☆22Dec 15, 2022Updated 3 years ago
- The official GitHub repository for the Nature Communications paper "Computational Design of Generalist Cyclopropanases with Stereodiverge…☆13Jan 23, 2026Updated 2 months ago
- ProteinDesign with RFdiffusion and ProteinMPNN/LigandMPNN☆23Mar 6, 2025Updated last year
- ☆21Oct 31, 2024Updated last year
- DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- ☆27Mar 13, 2026Updated 3 weeks ago
- DDGScan: an integrated parallel workflow for the in silico point mutation scan of protein☆49Mar 21, 2024Updated 2 years ago
- ☆10Nov 10, 2023Updated 2 years ago
- Collection of useful bioinformatic functions and tools for various computational biology pipelines☆43Updated this week
- ☆57Feb 16, 2026Updated last month
- Structure-based self-supervised learning enables ultrafast prediction of stability changes upon mutations☆102Dec 10, 2025Updated 4 months ago
- ProteinFeatureAnalyzer extracts, analyzes and visualizes features from protein structures.☆14Mar 14, 2020Updated 6 years ago
- Virtual screening approach for fragments selection and merging to lead-like compounds☆13Aug 20, 2021Updated 4 years ago
- A Memetic Algorithm boosts accuracy and speed of all-atom protein-protein docking☆29Jul 5, 2025Updated 9 months ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Code for running RFdiffusion☆19Dec 1, 2025Updated 4 months ago
- Physical energy function for protein sequence design☆38May 6, 2023Updated 2 years ago
- Conditioning diffusion models for scaffolding protein motifs. A repository for my master's dissertation.☆12Dec 10, 2024Updated last year
- Protein stability prediction using rewired protein generative models☆71Dec 25, 2025Updated 3 months ago
- ☆13Sep 29, 2023Updated 2 years ago
- A tool for predicting the effects of missense mutations on protein stability changes upon missense mutation using protein sequence only. …☆24Jun 3, 2023Updated 2 years ago
- Demos of many Rosetta applications☆24Jun 10, 2025Updated 10 months ago
- ☆16Dec 10, 2024Updated last year
- ThermoNet is a computational method for quantitative prediction of the impact of single-point mutations on protein thermodynamic stabilit…☆119Dec 20, 2023Updated 2 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click and start building anything your business needs.
- OPUS-Rota4: A Gradient-Based Protein Side-Chain Modeling Framework Assisted by Deep Learning-Based Predictors☆10Apr 14, 2022Updated 3 years ago
- open source repository☆147Nov 30, 2023Updated 2 years ago
- A lightweight pure python package for reading, writing and manipulating mmCIF files distributed by the wwPDB"☆38Oct 30, 2023Updated 2 years ago
- ☆74Feb 13, 2026Updated last month
- Model for predicting micro-millisecond motions from protein sequence and/or structure☆77Feb 2, 2026Updated 2 months ago
- GNN enabled surrogate modeling for chemical docking☆16Nov 3, 2022Updated 3 years ago
- Dock Multiple Ligands with AutoDock Vina with one Command☆11Jan 10, 2018Updated 8 years ago
- ☆10Apr 20, 2022Updated 3 years ago
- ☆126Feb 20, 2026Updated last month
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting with the flexibility to host WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Cloudways by DigitalOcean.
- Scoring methods for predicting the DDG upon protein mutation☆16Feb 20, 2023Updated 3 years ago
- ☆18Mar 13, 2024Updated 2 years ago
- Pocket to Concavity is a tool for refinement of Protein-Ligand binding site shape from alpha-spheres☆16Oct 2, 2024Updated last year
- Force Field X - Software for Molecular Biophysics☆25Mar 30, 2026Updated last week
- Clusters protein chains based on CA distance difference☆16Mar 18, 2026Updated 3 weeks ago
- Official code repository for the paper titled "Efficient Molecular Conformer Generation with SO(3) Averaged Flow-Matching and Reflow" (IC…☆14Jan 8, 2026Updated 3 months ago
- A Python framework for the rapid modeling of glycans☆19Oct 13, 2025Updated 5 months ago