DeepRank / PSSMGenLinks
Generates consistent PSSM and/or PDB files for protein-protein complexes
☆20Updated 2 years ago
Alternatives and similar repositories for PSSMGen
Users that are interested in PSSMGen are comparing it to the libraries listed below
Sorting:
- GTalign, HPC protein structure alignment, superposition and search (alpha release)☆45Updated 4 months ago
- Computer aided proximal decaging as a universal strategy for temporal protein activation☆23Updated last week
- ☆26Updated last month
- PyDock Tutorial☆32Updated 6 years ago
- A Memetic Algorithm boosts accuracy and speed of all-atom protein-protein docking☆27Updated last year
- Download pdb/protein structures using Uniprot id; This script will download related PDB files, extract chains(Optional), remove duplicate…☆41Updated 10 months ago
- Predicting the effect of mutations on protein stability and protein binding affinity using pretrained neural networks and a ranking objec…☆21Updated 4 years ago
- ☆49Updated 2 months ago
- An accurate and efficient protein sequence design approach☆24Updated 2 months ago
- ☆18Updated 2 months ago
- Fast and accurate protein domain segmentation using Invariant Point Attention☆40Updated 2 weeks ago
- Machine learning prediction of enzyme optimum pH☆41Updated last month
- A Motif-Based PPI Searching Pipeline for PPI Mining and Protein Design☆18Updated 3 months ago
- ☆30Updated last year
- Geometry-aware protein binding site predictor☆21Updated 9 months ago
- A tool for accurate prediction of a protein's secondary structure from only it's amino acid sequence☆54Updated 2 months ago
- Python tool for the discovery of similar 3D structural motifs across protein structures.☆27Updated last year
- A foundation model approach to guide antimicrobial peptide design in the era of artificial intelligence driven scientific discovery☆33Updated 3 weeks ago
- PyPEF – Pythonic Protein Engineering Framework☆24Updated last week
- Python package to manage protein structures and their annotations☆43Updated last year
- A domain parser for Alphafold models☆38Updated last year
- Material to run the HADDOCK antibody-antigen modelling protocol☆22Updated last year
- ProteinDesign with RFdiffusion and ProteinMPNN/LigandMPNN☆14Updated 3 months ago
- Antibody Annotation - Annotate VH and VL sequences (FR and CDR) in Python☆30Updated last year
- This repository contains scripts, data and jupyter notebooks used to produce the evaluation results in the BioPhi 2021 publication☆16Updated 2 years ago
- CArbohydrate-Protein Site IdentiFier☆11Updated last year
- Some Rosetta Scripts that allow for various simple tasks☆14Updated 5 years ago
- Repo contains source code of the SurfaceID paper☆23Updated last year
- ☆36Updated 7 months ago
- ☆39Updated last year