Alternatives and similar repositories for int_seq_des

Users that are interested in int_seq_des are comparing it to the libraries listed below

• jsunn-y / ALDE
  Active Learning-Assisted Directed Evolution for Protein Engineering
  ☆65Updated 9 months ago
• danny305 / StabilityOracle
  ☆28Updated last year
• samuelmurail / af_analysis
  Analysis of alphafold and colabfold results
  ☆31Updated 2 months ago
• drhicks / Kejia_peptide_binders
  code for IDR binding paper 2025
  ☆51Updated 7 months ago
• bene837 / af2seq
  ☆44Updated last year
• Wublab / Pythia
  Structure-based self-supervised learning enables ultrafast prediction of stability changes upon mutations
  ☆66Updated 2 months ago
• liuyf020419 / SCUBA-D
  ☆61Updated last year
• data2code / afpdb
  Efficient manipulation of protein structures in Python
  ☆57Updated this week
• cytokineking / FreeBindCraft
  BindCraft v1.52 modified to make PyRosetta use and installation optional
  ☆65Updated last week
• Kuhlman-Lab / evopro
  ☆87Updated last month
• psipred / Merizo
  Fast and accurate protein domain segmentation using Invariant Point Attention
  ☆41Updated 3 months ago
• AspirinCode / AlphaPPImd
  Exploring the conformational ensembles of protein-protein complexes with transformer-based generative neural networks
  ☆32Updated last year
• Jfeldman34 / AF3Complex
  ☆44Updated 2 months ago
• Kuhlman-Lab / ThermoMPNN-D
  Extension of ThermoMPNN for double mutant predictions
  ☆43Updated last month
• LBM-EPFL / CARBonAra
  Deep learning framework for protein sequence design from a backbone scaffold that can leverage the molecular context including non-protei…
  ☆44Updated 9 months ago
• Kuhlman-Lab / alphafold3
  Kuhlman Lab Installation of AlphaFold3
  ☆30Updated this week
• mabr3112 / riff_diff_protflow
  ProtFlow Implementation of the RiffDiff pipeline to design enzymes from theozymes.
  ☆34Updated this week
• luo-group / MODIFY
  ML-optimized library design with improved fitness and diversity for protein engineering
  ☆35Updated last year
• DunbrackLab / IPSAE
  Scoring function for interprotein interactions in AlphaFold2 and AlphaFold3
  ☆96Updated 5 months ago
• ievapudz / TemStaPro
  TemStaPro - a program for protein thermostability prediction using sequence representations from a protein language model.
  ☆63Updated last year
• patrickbryant1 / AFProfile
  Improved protein complex prediction with AlphaFold-multimer by denoising the MSA profile
  ☆69Updated last year
• liedllab / surface_analyses
  Scores for Hydrophobicity and Charges based on SASAs
  ☆37Updated 3 months ago
• GMdSilva / gms_natcomms_1705932980_data
  Data sharing for High-throughput Prediction of Changes in Protein Conformational Distributions with Subsampled AlphaFold2
  ☆39Updated last year
• PeptoneLtd / proteinmpnn_ddg
  Novel estimator for the change in stability upon point mutation in monomeric and multimeric proteins.
  ☆52Updated 3 months ago
• ohuelab / ColabFold-cycpep-dock
  Making Protein folding accessible to all!
  ☆23Updated last year
• ELELAB / RosettaDDGPrediction
  ☆75Updated 7 months ago
• KULL-Centre / _2022_ML-ddG-Blaabjerg
  ☆52Updated last month
• oxpig / Humatch
  Fast, gene-specific joint humanisation of antibody heavy and light chains.
  ☆16Updated 9 months ago
• bigict / ProDESIGN-LE
  An accurate and efficient protein sequence design approach
  ☆25Updated 6 months ago
• novonordisk-research / pepfunn
  Python package for the analysis of natural and modified peptides using a set of modules to study their sequences
  ☆38Updated 2 months ago