luhong88 / int_seq_desLinks
Integrative protein sequence design with evolutionary multiobjective optimization.
☆12Updated last year
Alternatives and similar repositories for int_seq_des
Users that are interested in int_seq_des are comparing it to the libraries listed below
Sorting:
- Active Learning-Assisted Directed Evolution for Protein Engineering☆78Updated 3 months ago
- ProtFlow Implementation of the RiffDiff pipeline to design enzymes from theozymes.☆80Updated 2 months ago
- ☆94Updated 3 months ago
- Novel estimator for the change in stability upon point mutation in monomeric and multimeric proteins.☆61Updated 8 months ago
- Extension of ThermoMPNN for double mutant predictions☆53Updated 4 months ago
- HyperMPNN ‒ A general strategy to design thermostable proteins learned from hyperthermophiles☆70Updated 7 months ago
- BindCraft modified to make PyRosetta use and installation optional: no license needed☆119Updated 2 months ago
- ☆84Updated 2 months ago
- Structure-based self-supervised learning enables ultrafast prediction of stability changes upon mutations☆95Updated 2 months ago
- ☆47Updated last year
- Efficient manipulation of protein structures in Python☆63Updated 4 months ago
- ☆45Updated 10 months ago
- ☆61Updated last year
- AlphaFold-initiated replica exchange protein docking☆87Updated 8 months ago
- Fast and accurate protein domain segmentation using Invariant Point Attention☆46Updated 8 months ago
- Deep learning framework for protein sequence design from a backbone scaffold that can leverage the molecular context including non-protei…☆47Updated 3 months ago
- ☆30Updated 4 months ago
- Analysis of alphafold and colabfold results☆34Updated last month
- ☆74Updated 10 months ago
- A Score-Only Adaptation of AlphaFold3 for Biomolecular Structure Evaluation☆108Updated 2 weeks ago
- Official repository for the ProteinDJ protein design pipeline☆87Updated 3 weeks ago
- OVO, an open-source ecosystem for de novo protein design☆104Updated 3 weeks ago
- Improved protein complex prediction with AlphaFold-multimer by denoising the MSA profile☆72Updated last year
- Physics-Guided All-Atom Diffusion Model for Accurate Protein-Ligand Complex Prediction☆87Updated 4 months ago
- Kuhlman Lab Installation of AlphaFold3☆39Updated 4 months ago
- ML-optimized library design with improved fitness and diversity for protein engineering☆36Updated 3 months ago
- TemStaPro - a program for protein thermostability prediction using sequence representations from a protein language model.☆72Updated last year
- This is the official code repository for the paper NeurIPS 2024 spotlight paper "Kermut: Composite kernel regression for protein variant …☆42Updated 6 months ago
- Graphinity: Equivariant Graph Neural Network Architecture for Predicting Change in Antibody-Antigen Binding Affinity☆57Updated 7 months ago
- ☆56Updated 5 months ago