luhong88 / int_seq_desLinks
Integrative protein sequence design with evolutionary multiobjective optimization.
☆12Updated last year
Alternatives and similar repositories for int_seq_des
Users that are interested in int_seq_des are comparing it to the libraries listed below
Sorting:
- Active Learning-Assisted Directed Evolution for Protein Engineering☆76Updated 2 months ago
- Structure-based self-supervised learning enables ultrafast prediction of stability changes upon mutations☆86Updated 3 weeks ago
- BindCraft modified to make PyRosetta use and installation optional: no license needed☆108Updated last month
- Extension of ThermoMPNN for double mutant predictions☆50Updated 2 months ago
- AlphaFold-initiated replica exchange protein docking☆86Updated 6 months ago
- Analysis of alphafold and colabfold results☆32Updated last week
- Official repository for the ProteinDJ protein design pipeline☆77Updated 2 weeks ago
- code for IDR binding paper 2025☆65Updated 10 months ago
- TemStaPro - a program for protein thermostability prediction using sequence representations from a protein language model.☆67Updated last year
- ProtFlow Implementation of the RiffDiff pipeline to design enzymes from theozymes.☆62Updated 3 weeks ago
- ☆93Updated 2 months ago
- ☆84Updated last month
- Improved protein complex prediction with AlphaFold-multimer by denoising the MSA profile☆70Updated last year
- HyperMPNN ‒ A general strategy to design thermostable proteins learned from hyperthermophiles☆69Updated 5 months ago
- A command-line interface and Python library for generating AlphaFold3 input files.☆38Updated 6 months ago
- ☆47Updated 11 months ago
- Toolkit for alphafold3 input and output files☆96Updated this week
- Kuhlman Lab Installation of AlphaFold3☆37Updated 3 months ago
- ☆46Updated last year
- ☆74Updated last year
- ML-optimized library design with improved fitness and diversity for protein engineering☆36Updated last month
- Scoring function for interprotein interactions in AlphaFold2 and AlphaFold3☆176Updated 8 months ago
- ☆54Updated 4 months ago
- ☆72Updated 9 months ago
- ☆29Updated 2 months ago
- Machine Learning models for in vitro enzyme kinetic parameter prediction☆65Updated 8 months ago
- Small_molecule_binder_design_use_pseudocycles☆23Updated last year
- ☆52Updated 6 months ago
- ☆25Updated last year
- Deep learning framework for protein sequence design from a backbone scaffold that can leverage the molecular context including non-protei…☆46Updated last month