A thin wrapper around ProteinMPNN for convenient sampling without having to write out or consume files
☆12Apr 29, 2024Updated 2 years ago
Alternatives and similar repositories for proteinmpnn_wrapper
Users that are interested in proteinmpnn_wrapper are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ProteinDesign with RFdiffusion and ProteinMPNN/LigandMPNN☆26Mar 6, 2025Updated last year
- A Fast, Simplified Model for Molecular Generation with Improved Physical Quality☆28Oct 1, 2025Updated last year
- Code and notebook for our paper "Assessing interaction recovery of predicted protein-ligand poses"☆25Oct 2, 2024Updated 2 years ago
- Metrics for assessing 3D molecular structures.☆11May 9, 2026Updated 5 months ago
- ☆12Apr 6, 2024Updated 2 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Potts model-based protein sequence design☆118Jul 1, 2026Updated 3 months ago
- Send data to and from pymol from a remote server (e.g. a cluster running deep learning workflows)☆38Feb 17, 2025Updated last year
- Highly accurate discovery of terpene synthases powered by machine learning☆18Sep 15, 2026Updated last month
- Score-based 3D molecule generation with neural fields - NeurIPS 2024☆30Dec 3, 2024Updated last year
- Energy minimization post-processing used in PoseBusters☆14Apr 4, 2025Updated last year
- It's a package for evaluation of predicted poses, right?☆79Jul 13, 2026Updated 3 months ago
- DeepSpot2Cell: Predicting virtual single-cell spatial transcriptomics from H&E images using spot-level supervision☆23Oct 5, 2026Updated 2 weeks ago
- This is the official code repository for the paper FLOP: Tasks for Fitness Landscapes Of Protein wildtypes by Groth et al.☆23Jun 26, 2023Updated 3 years ago
- ☆21Aug 31, 2026Updated last month
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- A conditionally adapted protein language model for the generation of enzymes☆24Nov 26, 2024Updated last year
- ☆58May 26, 2026Updated 4 months ago
- Bias-controlled 3D generative framework for structure-based ligand design☆17Nov 2, 2022Updated 3 years ago
- A drop-in replacement for Rosetta Relax☆30Jan 30, 2026Updated 8 months ago
- ☆37Sep 21, 2023Updated 3 years ago
- A Python package to manage protein design workflows on computing clusters and local machines. Documentation can be found here: https://pr…☆43Aug 17, 2026Updated 2 months ago
- Integrative protein sequence design with evolutionary multiobjective optimization.☆13Jul 16, 2024Updated 2 years ago
- Training materials and accompanying documentation for "Mastering Transformers: From Building Blocks to Real World Applications" training.☆13Sep 13, 2023Updated 3 years ago
- A set of python tools to deal with PDB chemical components definitions for small molecules, taken from the wwPDB Chemical Component Dicti…☆85Oct 6, 2026Updated last week
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- A curated list of awesome self-learning materials in Computational Structural Biology, such as sources, tutorials, etc.☆61Sep 6, 2022Updated 4 years ago
- ☆10Nov 10, 2023Updated 2 years ago
- 🧬 - Data management and modeling framework based on EnzymeML.☆26Updated this week
- Extension of ThermoMPNN for double mutant predictions☆66Mar 23, 2026Updated 6 months ago
- TMol - Rosetta on the GPU☆99Updated this week
- Chroma Protein Diffusion Model☆12Nov 16, 2023Updated 2 years ago
- Metal and Water prediction☆16Feb 5, 2025Updated last year
- Profluent-E1 family of Protein Encoder Models☆115Mar 11, 2026Updated 7 months ago
- Proteina is a new large-scale flow-based protein backbone generator that utilizes hierarchical fold class labels for conditioning and rel…☆280Jul 24, 2025Updated last year
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- De Novo Protein Design by Equivariantly Diffusing Oriented Residue Clouds☆190Apr 21, 2024Updated 2 years ago
- Python implementation for Combining Latent Space and Structured Kernels for Bayesian Optimization over Combinatorial Spaces.☆13Nov 30, 2021Updated 4 years ago
- bakerlab pymol scripts☆27Feb 6, 2020Updated 6 years ago
- Updated Protpardelle models with more robust motif scaffolding and multichain support☆88Oct 2, 2026Updated 2 weeks ago
- Shrinking Proteins with Diffusion☆32Updated this week
- A comprehensive computational pipeline that bridges single-cell genomics and cheminformatics to accelerate Alzheimer's Disease research. …☆12Jul 13, 2025Updated last year
- ☆34Feb 5, 2025Updated last year