fhidalgor / mutagenesis_visualizationLinks
Software for the analysis and visualization of site-saturation mutagenesis experiments
☆16Updated 2 years ago
Alternatives and similar repositories for mutagenesis_visualization
Users that are interested in mutagenesis_visualization are comparing it to the libraries listed below
Sorting:
- ☆20Updated 2 weeks ago
- Evolutionary conservation estimation of residues or nucleotides☆47Updated 3 years ago
- Code, intermediate results and an interactive visualisation on prediction of putative novel enzymes and small molecule binding proteins p…☆26Updated 2 years ago
- Python Client Library for the G2P Portal API☆12Updated 3 weeks ago
- Prediction of protein substitution impact using a directional substitution matrix and homolog alignments☆12Updated 3 years ago
- Python code to color a PDB structure based on parameters from a multiple sequence alignment☆32Updated 2 years ago
- A package for making tree-based visualizations for embedding vectors☆10Updated 2 years ago
- a collection of colabs useful for molecular biology☆31Updated last year
- GraphPart, a data partitioning method for ML on biological sequences☆29Updated last year
- Scripts for "Determining protein structures using deep mutagenesis", Schmiedel & Lehner, Nature Genetics, 2019☆17Updated 6 years ago
- MOLeculAR structure annoTator☆34Updated 11 months ago
- ☆18Updated 3 weeks ago
- ☆22Updated 2 years ago
- Virus Protein Structural Analysis Toolkit☆12Updated 11 months ago
- Repository for "Nearest neighbor search on embeddings rapidly identifies distant protein relations"☆13Updated 2 years ago
- ☆12Updated last year
- Code for LazyAF pipeline☆20Updated last year
- Python wrapper to design RNA molecules using RNAblueprint, RNARedPrint and for energy evaluations ViennaRNA, Hotknots, pKiss and Nupack.☆21Updated 6 years ago
- A platform to do RNA science☆27Updated 4 years ago
- A Python package for mapping sequence aligned data onto protein structures☆36Updated 4 years ago
- SPECTRA: Spectral framework for evaluation of biomedical AI models☆40Updated 5 months ago
- Scripts to generate and analyze afdb clusters☆11Updated last year
- VDJ assignment and antibody sequence annotation. Scalable from a single sequence to billions of sequences.☆42Updated 3 weeks ago
- Fast protein domain structure embedding+search tool☆25Updated 3 months ago
- Use machine learning to design codon-optimized DNA sequences for increased protein expression.☆15Updated 2 years ago
- Frankies Scalable, AI-Based Antibody Design Pipeline☆16Updated 2 months ago
- Python package and command line tool for epitope prediction☆52Updated last year
- EvoEF + evolutionary profile for ddG_bind prediction☆14Updated 2 years ago
- Pipeline for assessing the tractability of potential targets (starting from Gene IDs)☆27Updated 6 months ago
- Visualise RNA secondary structure in consistent, reproducible and recognisable layouts☆74Updated last month