JianYang-Lab / MeDuSALinks
MeDuSA is a fine-resolution cellular deconvolution method that leverages scRNA-seq data as a reference to estimate cell-state abundance in bulk RNA-seq data.
☆43Updated 10 months ago
Alternatives and similar repositories for MeDuSA
Users that are interested in MeDuSA are comparing it to the libraries listed below
Sorting:
- identifying disease critical cell types and programs from single cell RNAseq☆57Updated 3 years ago
- ☆57Updated last year
- Gene group activity utility functions for Scanpy☆99Updated last year
- ☆62Updated 2 years ago
- A unified interface to spatial transcriptomics deconvolution tools☆45Updated last month
- scWGCNA☆61Updated 3 years ago
- Bostongene cell deconvolution algorithm from RNAseq☆60Updated last year
- Aligning gene expression trajectories of single-cell reference and query systems☆80Updated 4 months ago
- ☆31Updated 2 years ago
- Repository for the building, sharing and editing of scRNAseq pipelines for the Lung Cell Atlas☆39Updated 4 years ago
- Code repository for single cell RNA-seq☆39Updated 5 years ago
- Cell age determination by scATAC-seq and bulk-ATAC-seq☆32Updated last year
- ☆40Updated 2 years ago
- ☆53Updated 2 years ago
- ☆19Updated 3 years ago
- Integration of gut cell atlases☆31Updated 2 months ago
- SPROD: Spatial expression profiling de-noising☆36Updated 2 years ago
- Code used to process the data of the HBCA project☆32Updated last year
- ☆40Updated 6 months ago
- ☆32Updated 3 years ago
- ☆34Updated 2 years ago
- ☆60Updated 4 months ago
- cell type specific, trait-associated gene regulation☆29Updated 9 months ago
- CellANOVA: Cell State Space Analysis of Variance for signal recovery in single cell batch integration☆53Updated last year
- Single-Cell ENhancer Target gene mapping using multimodal data with ATAC + RNA☆82Updated 8 months ago
- Beyondcell is a computational methodology for identifying tumour cell subpopulations with distinct drug responses in single-cell RNA-seq …☆56Updated last year
- Gene regulatory network containing signed transcription factor-target gene interactions☆93Updated 7 months ago
- Draw phylogenetic trees of tumor evolution☆86Updated 2 years ago
- ☆39Updated 4 months ago
- ☆48Updated 11 months ago