SIWLab / Lab_InfoLinks
info and docs for the Wright Lab
☆15Updated 10 years ago
Alternatives and similar repositories for Lab_Info
Users that are interested in Lab_Info are comparing it to the libraries listed below
Sorting:
- Tutorial about R package PopGenome☆43Updated 6 years ago
- A shiny application to visualize MCscan result☆38Updated 3 years ago
- dnaPipeTE (for de-novo assembly & annotation Pipeline for Transposable Elements), is a pipeline designed to find, annotate and quantify T…☆59Updated 2 years ago
- ☆45Updated 9 years ago
- Genome Annotation Pipeline☆42Updated last year
- Few scripts facilitating the extraction of info from Repeat Masker .out files☆84Updated 4 years ago
- Tutorials on evolutionary genomics☆46Updated 3 years ago
- Bulked-Segregant Analysis using vcf file with or without parents☆32Updated last year
- A collection of scripts for working with Hi-C data, Juicebox, and other genomic file formats☆68Updated 4 years ago
- Materials for genome annotation sessions at the WORKSHOP ON GENOMICS, CESKY KRUMLOV☆21Updated 2 weeks ago
- Quantifying Introgression via Branch Lengths☆56Updated 3 years ago
- RAiSD: software to detect positive selection based on multiple signatures of a selective sweep and SNP vectors☆37Updated 2 years ago
- A quick user guide for de novo transposable element (TE) library generation and TE screening. Utilising; the Extensive de novo TE Annotat…☆27Updated 3 years ago
- scripts for the project of seven thaliana genomes assembly☆42Updated 4 years ago
- ☆41Updated 2 years ago
- R functions for generating site frequency spectra (SFS) from a VCF file.☆28Updated 5 years ago
- Useful bioinformatic scripts☆59Updated last year
- Accompanying repository for our publications on manual curation methods for Transposable Elements.☆21Updated last year
- A program to call variants from genome alignment☆81Updated 9 months ago
- MUM&Co uses Whole Genome Alignment information provided by MUMmer (only v4) to detect Structural Variation☆76Updated 3 weeks ago
- ☆24Updated 8 years ago
- ☆42Updated 2 years ago
- Python wrappers for programs that search for transposable elements☆19Updated 9 years ago
- A software to assemble chloroplast and mitochodrial genomes using PacBio data☆40Updated 5 years ago
- Read, manipulate and visualize 'Pairwise mApping Format' data in R☆77Updated 4 years ago
- ☆54Updated 7 months ago
- Portable solution to generate genome alignment chains using lastz☆60Updated last month
- Pan-genome Construction and Population Structure Variation Calling pipeline☆45Updated last year
- use long sequenced reads to close gaps in assemblies☆40Updated 7 years ago
- loco-pipe is an automated Snakemake pipeline that streamlines a set of essential population genomic analyses for low-coverage whole genom…☆29Updated 2 weeks ago