tonig-evo / workshop-popgenome
Tutorial about R package PopGenome
☆39Updated 5 years ago
Related projects: ⓘ
- SambaR: Snp datA Management and Basic Analyses in R☆24Updated last month
- The stairway plot is a method for inferring detailed population demographic history using the site frequency spectrum (SFS) from DNA sequ…☆31Updated last year
- paml documentation and tutorials☆43Updated last year
- Automated de novo assembly of whole chloroplast genomes.☆43Updated 8 months ago
- Tutorials on evolutionary genomics☆41Updated 2 years ago
- Detecting natural selection from population-based genetic data☆27Updated 5 years ago
- Tutorials on phylogenomic analyses for the ForBio Phylogenomics course☆30Updated 6 months ago
- MSMC2 Scripts☆22Updated 6 months ago
- Repository for speciation genomics website☆24Updated 2 months ago
- Analysis of convergence between organismal traits and DNA/protein sequences☆43Updated 2 months ago
- Files for the the Physalia course on Population genomic inference from low-coverage whole-genome sequencing data, Oct 10-13, 2022☆49Updated 6 months ago
- Quantifying Introgression via Branch Lengths☆49Updated last year
- Scripts to analyze data using TreeMix. This pipeline runs TreeMix with bootstrapping, helps choose number of migration events and creates…☆19Updated 6 months ago
- R functions for generating site frequency spectra (SFS) from a VCF file.☆26Updated 4 years ago
- Code used to analyse WGS data of giraffe in Coimbra et al. 2021☆10Updated 11 months ago
- Presentations from the course☆34Updated last year
- ☆37Updated last year
- R Package to Estimate Variable Recombination Rates using Population Genetic Data☆38Updated 4 years ago
- Pipelines and tools for the processing of ancient and modern HTS data.☆43Updated last month
- info and docs for the Wright Lab☆14Updated 8 years ago
- A shiny application to visualize MCscan result☆31Updated last year
- Assessing confidence in introgression among four populations☆26Updated 3 years ago
- Tutorial on using popular tools for learning about population history☆49Updated 6 years ago
- Graph-aware Retrieval of Selective Sweeps☆20Updated this week
- Read, manipulate and visualize 'Pairwise mApping Format' data in R☆65Updated 3 years ago
- ☆24Updated last year
- Sex assignment through coverage☆17Updated 6 months ago
- predicting DFE and alpha from polymorphism data☆27Updated 5 years ago
- MCMCtreeR: A package to estimate distribution values for temporal node constraints and prepare input files for MCMCtree☆41Updated 4 years ago
- BUSCO Phylogenomics | Utility script to construct species phylogenies using BUSCO proteins☆45Updated 7 months ago