tonig-evo / workshop-popgenomeLinks
Tutorial about R package PopGenome
☆43Updated 6 years ago
Alternatives and similar repositories for workshop-popgenome
Users that are interested in workshop-popgenome are comparing it to the libraries listed below
Sorting:
- Quantifying Introgression via Branch Lengths☆54Updated 3 years ago
- Tutorials on evolutionary genomics☆46Updated 3 years ago
- SambaR: Snp datA Management and Basic Analyses in R☆30Updated last month
- Topology weighting by iterative sampling of sub-trees☆81Updated 9 months ago
- R functions for generating site frequency spectra (SFS) from a VCF file.☆28Updated 5 years ago
- Hybridization detection using phylogenetic invariants☆49Updated 11 months ago
- A pipeline that accepts a VCF file to run through Admixture☆62Updated 9 months ago
- Presentations from the course☆38Updated 2 years ago
- Automated de novo assembly of whole chloroplast genomes.☆47Updated last year
- A program to call variants from genome alignment☆81Updated 5 months ago
- Tutorials on phylogenomic analyses for the ForBio Phylogenomics course☆37Updated last year
- RAiSD: software to detect positive selection based on multiple signatures of a selective sweep and SNP vectors☆36Updated last year
- Few scripts facilitating the extraction of info from Repeat Masker .out files☆83Updated 4 years ago
- Assessing confidence in introgression among four populations☆27Updated 4 years ago
- GONE: Scripts, programs and an example data set☆47Updated 2 months ago
- Synteny Imager☆64Updated 2 months ago
- ☆44Updated 8 years ago
- ☆42Updated 2 years ago
- An accessible and flexible tool for fitting demographic models with dadi using custom or published models (available here), conducting go…☆66Updated last year
- Methods for examining PCA locally along the genome.☆83Updated last year
- Tutorials on phylogenetic and phylogenomic inference☆49Updated 5 months ago
- Portable solution to generate genome alignment chains using lastz☆59Updated 2 weeks ago
- dnaPipeTE (for de-novo assembly & annotation Pipeline for Transposable Elements), is a pipeline designed to find, annotate and quantify T…☆58Updated 2 years ago
- MSMC2 Scripts☆27Updated 2 weeks ago
- Scripts to analyze data using TreeMix. This pipeline runs TreeMix with bootstrapping, helps choose number of migration events and creates…☆37Updated last year
- A software to assemble chloroplast and mitochodrial genomes using PacBio data☆40Updated 5 years ago
- Infer demographic history with the Moran model☆48Updated 3 months ago
- A new simple and efficient software to PCA and Cluster For popolation VCF File☆81Updated 3 months ago
- Repository for speciation genomics website☆26Updated last month
- NLR-Annotator upload☆72Updated 2 years ago