A structure-aware interpretable deep learning model for sequence-based prediction of protein-protein interactions
☆113Feb 19, 2026Updated 2 months ago
Alternatives and similar repositories for D-SCRIPT
Users that are interested in D-SCRIPT are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆19Aug 6, 2019Updated 6 years ago
- Rapid protein-protein interaction network creation from multiple sequence alignments with Deep Learning☆90Mar 22, 2024Updated 2 years ago
- PLM-interact: extending protein language models to predict protein-protein interactions.☆68Aug 29, 2025Updated 8 months ago
- A PyTorch implementation of GCN with mutual attention for protein-protein interaction prediction☆61Aug 7, 2021Updated 4 years ago
- Code associated with the paper 'Cracking the blackbox of deep sequence-based protein-protein interaction prediction'☆31Jan 8, 2024Updated 2 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Predicting direct protein-protein interactions with AlphaFold deep learning neural network models.☆174Sep 8, 2024Updated last year
- Protein-protein interaction sites prediction through combining local and global features with deep neural networks☆54Oct 12, 2019Updated 6 years ago
- ☆35Dec 15, 2023Updated 2 years ago
- predicting peptide-protein interactions☆141Dec 23, 2023Updated 2 years ago
- A fast, alignment-free method for estimating sequence conservation using protein sequence embedding☆20Feb 6, 2023Updated 3 years ago
- Deploying synthetic coevolution and machine learning to engineer protein-protein interactions☆16Jul 30, 2023Updated 2 years ago
- MaSIF- Molecular surface interaction fingerprints. Geometric deep learning to decipher patterns in molecular surfaces.☆747Jun 19, 2024Updated last year
- Decoding the functional networks of non-model organisms☆12Mar 11, 2026Updated last month
- ☆37Jan 15, 2023Updated 3 years ago
- End-to-end encrypted email - Proton Mail • AdSpecial offer: 40% Off Yearly / 80% Off First Month. All Proton services are open source and independently audited for security.
- ☆24Mar 29, 2021Updated 5 years ago
- Improved protein complex prediction with AlphaFold-multimer by denoising the MSA profile☆72Apr 13, 2026Updated 3 weeks ago
- This is the repository for PIPR. This repository contains the source code and links to some datasets used in the ISMB/ECCB-2019 paper "Mu…☆112Jan 14, 2023Updated 3 years ago
- Rotamer Density Estimator is an Unsupervised Learner of the Effect of Mutations on Protein-Protein Interaction (ICLR 2023)☆63Jun 17, 2024Updated last year
- Inference code for PoET: A generative model of protein families as sequences-of-sequences☆96Apr 24, 2024Updated 2 years ago
- LoRA for protein language models☆48Jan 24, 2024Updated 2 years ago
- ☆33Jun 1, 2024Updated last year
- Bilingual Language Model for Protein Sequence and Structure☆310Mar 6, 2026Updated last month
- ☆22May 31, 2023Updated 2 years ago
- End-to-end encrypted email - Proton Mail • AdSpecial offer: 40% Off Yearly / 80% Off First Month. All Proton services are open source and independently audited for security.
- Foldseek enables fast and sensitive comparisons of large structure sets.☆1,226Mar 10, 2026Updated last month
- Trainable representation analysis study repository☆44Apr 5, 2022Updated 4 years ago
- ☆93Sep 7, 2022Updated 3 years ago
- ProtTrans is providing state of the art pretrained language models for proteins. ProtTrans was trained on thousands of GPUs from Summit a…☆1,304May 22, 2025Updated 11 months ago
- Code for ColabDock paper☆155May 1, 2025Updated last year
- The Enhanced Database of Interacting Protein Structures for Interface Prediction☆55Aug 29, 2025Updated 8 months ago
- Making Protein Language Modeling Accessible to All Biologists☆161Apr 27, 2026Updated last week
- Making Protein Design accessible to all via Google Colab!☆912Apr 6, 2026Updated 3 weeks ago
- De Novo Protein Design by Equivariantly Diffusing Oriented Residue Clouds☆186Apr 21, 2024Updated 2 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Saprot: Protein Language Model with Structural Alphabet (AA+3Di)☆593Mar 8, 2026Updated last month
- ✌🏻 Antigen-Specific Antibody Design and Optimization with Diffusion-Based Generative Models for Protein Structures (NeurIPS 2022)☆359Jun 29, 2023Updated 2 years ago
- Official repository for the ProteinGym benchmarks☆421Mar 25, 2026Updated last month
- ☆22Mar 28, 2024Updated 2 years ago
- Protein common interface databases☆10Apr 13, 2019Updated 7 years ago
- Fast and easy contact prediction.☆38May 24, 2024Updated last year
- Implementation of DiffDock-PP: Rigid Protein-Protein Docking with Diffusion Models in PyTorch (ICLR 2023 - MLDD Workshop)☆235Dec 29, 2023Updated 2 years ago