pgmikhael / protgpsLinks
☆96Updated 5 months ago
Alternatives and similar repositories for protgps
Users that are interested in protgps are comparing it to the libraries listed below
Sorting:
- python tools for TCR:peptide-MHC modeling and analysis☆82Updated last year
- Geometric deep learning of protein–DNA binding specificity☆76Updated 7 months ago
- Fast AlphaFold-Multimer based pipeline for Protein-Protein Interaction (PPI) screening☆39Updated last year
- ☆91Updated last year
- Rapid protein-protein interaction network creation from multiple sequence alignments with Deep Learning☆90Updated last year
- alphafold3 architecture step by step walkthrough.☆143Updated 5 months ago
- Evolutionary velocity with protein language models☆94Updated 2 years ago
- ☆82Updated 2 years ago
- ColabFold protocol☆57Updated last year
- Nature Biotechnology: Ultra-fast, sensitive detection of protein remote homologs using deep dense retrieval☆120Updated last year
- Code repository of "Deep generative design of RNA family sequences"☆38Updated this week
- BigMHC predicts MHC-I (neo)epitope presentation and immunogenicity☆56Updated last year
- Install alphafold on the local machine, get out of docker.☆104Updated 3 years ago
- Deep-learning empowered prediction and generation of immunogenic epitopes for T cell immunity☆73Updated 2 years ago
- CodonTransformer (1M+ Downloads); The tool for codon optimization, optimizing DNA for protein expression☆184Updated 3 months ago
- De novo peptide sequencing with InstaNovo: Accurate, database-free peptide identification for large scale proteomics experiments☆103Updated last month
- Protein language model trained on coding DNA☆51Updated last year
- Learning the language of protein-protein interactions☆102Updated last month
- PLMSearch enables accurate and fast homologous protein search with only sequences as input☆74Updated 2 months ago
- CodonBert: a BERT-based architecture tailored for codon optimization using the cross-attention mechanism.☆40Updated last year
- A tool for protein and protein complex structure prediction.☆29Updated 5 months ago
- ☆38Updated 2 weeks ago
- A structure-aware interpretable deep learning model for sequence-based prediction of protein-protein interactions☆104Updated last week
- https://www.nature.com/articles/s41598-020-74091-z#Tab1☆40Updated last year
- A visualization software for antibody multi sequence alignment☆21Updated last year
- Neural Networks for Protein Sequence Alignment☆131Updated last year
- Improving RNA structure prediction through multitask learning on diverse crowdsourced data.☆62Updated last year
- Official release of the ProGen models☆41Updated 9 months ago
- Fast deep learning methods for large-scale protein-protein interaction screening☆95Updated 3 months ago
- ☆37Updated last year