Superzchen / iLearnPlusLinks
iLearnPlus is the first machine-learning platform with both graphical- and web-based user interface that enables the construction of automated machine-learning pipelines for computational analysis and predictions using nucleic acid and protein sequences.
☆110Updated last year
Alternatives and similar repositories for iLearnPlus
Users that are interested in iLearnPlus are comparing it to the libraries listed below
Sorting:
- Download pdb/protein structures using Uniprot id; This script will download related PDB files, extract chains(Optional), remove duplicate…☆41Updated 11 months ago
- Install alphafold on the local machine, get out of docker.☆101Updated 3 years ago
- Nature Biotechnology: Ultra-fast, sensitive detection of protein remote homologs using deep dense retrieval☆112Updated 10 months ago
- python tools for TCR:peptide-MHC modeling and analysis☆79Updated last year
- iFeatureOmega is a comprehensive platform for generating, analyzing and visualizing more than 170 representations for biological sequence…☆34Updated last year
- ☆74Updated last year
- Nature Computational Science: Unbiased organism-agnostic and highly sensitive signal peptide predictor with deep protein language model☆30Updated last month
- Multi-class signal peptide prediction and structure decoding model.☆87Updated 4 months ago
- Collects software dedicated to predicting specific properties of peptides☆61Updated 6 months ago
- Multi-task and masked language model-based protein sequence embedding models.☆102Updated 4 years ago
- BigMHC predicts MHC-I (neo)epitope presentation and immunogenicity☆53Updated last year
- https://www.nature.com/articles/s41598-020-74091-z#Tab1☆40Updated last year
- ☆31Updated 3 years ago
- PyMOL extension to color AlphaFold structures by confidence (pLDDT).☆104Updated 11 months ago
- Geometric deep learning of protein–DNA binding specificity☆74Updated 3 months ago
- Pipeline for de novo peptide sequencing (Novor, DeepNovo, SMSNet, PointNovo, Casanovo) and assembly with ALPS.☆40Updated last year
- predicting peptide-protein interactions☆132Updated last year
- GPro: a toolbox for Generative approaches in promoter design☆19Updated last year
- ☆89Updated 8 months ago
- Feature map and function annotation of Proteins☆33Updated last year
- ☆83Updated 2 years ago
- Universal Structure Alignment of Monomeric and Complex Structure of Nucleic Acids and Proteins☆147Updated 2 months ago
- Official implement of paper "Multi-purpose RNA Language Modeling with Motif-aware Pre-training and Type-guided Fine-tuning"☆47Updated 8 months ago
- Code for ColabDock paper☆141Updated 2 months ago
- ☆87Updated 2 weeks ago
- Deep-learning empowered prediction and generation of immunogenic epitopes for T cell immunity☆69Updated 2 years ago
- ☆49Updated last year
- A software package for computing features of peptides and proteins☆60Updated last year
- Physicochemical properties, indices and descriptors for amino-acid sequences.☆97Updated 2 months ago
- A list of tools on proteomics using deep learning☆97Updated last year