VariantEffect / mavedb-apiLinks
MaveDB API
☆16Updated last week
Alternatives and similar repositories for mavedb-api
Users that are interested in mavedb-api are comparing it to the libraries listed below
Sorting:
- ☆86Updated 2 years ago
- Evolutionary velocity with protein language models☆95Updated last month
- ☆95Updated last year
- python tools for TCR:peptide-MHC modeling and analysis☆88Updated last year
- BigMHC predicts MHC-I (neo)epitope presentation and immunogenicity☆60Updated last month
- Official repository for the paper "Large-scale clinical interpretation of genetic variants using evolutionary data and deep learning". Jo…☆191Updated last year
- Large language modeling applied to T-cell receptor (TCR) sequences.☆59Updated 3 years ago
- Multi-class signal peptide prediction and structure decoding model.☆102Updated last year
- ☆97Updated 7 months ago
- CodonBert: a BERT-based architecture tailored for codon optimization using the cross-attention mechanism.☆41Updated last year
- Deep-learning empowered prediction and generation of immunogenic epitopes for T cell immunity☆75Updated 2 years ago
- STAPLER (Shared TCR And Peptide Language bidirectional Encoder Representations from transformers) is a language model that uses a joint T…☆28Updated 9 months ago
- Neural Networks for Protein Sequence Alignment☆135Updated last year
- ☆22Updated 3 years ago
- Genomic language model predicts protein co-regulation and function☆86Updated 10 months ago
- Mutation effects predicted from sequence co-variation☆72Updated 8 years ago
- RiboNN: predicting translation efficiencies from mRNA sequences☆50Updated 3 weeks ago
- Biological prediction models made simple.☆48Updated 3 weeks ago
- Repository for mRNA Paper and CodonBERT publication.☆143Updated last year
- TCR validated database☆44Updated 9 months ago
- A visualization software for antibody multi sequence alignment☆22Updated last year
- Protein language model trained on coding DNA☆53Updated last year
- ☆36Updated last year
- Geometric deep learning of protein–DNA binding specificity☆76Updated 10 months ago
- ☆76Updated last year
- Species-aware DNA language modeling☆18Updated 3 years ago
- Code and data to reproduce analyses in Biswas et al. (2020) "Low-N protein engineering with data-efficient deep learning".☆60Updated 4 years ago
- Draw RNA secondary structures in python.☆49Updated 7 months ago
- Nature Biotechnology: Ultra-fast, sensitive detection of protein remote homologs using deep dense retrieval☆121Updated last year
- Bioinformatics code for paper associated with deep diversification of AAV☆42Updated last year