Alternatives and similar repositories for lncRNA-folding:

Users that are interested in lncRNA-folding are comparing it to the libraries listed below

• Doudna-lab / GARNET_DL
  ☆33Updated last month
• samsledje / D-SCRIPT
  A structure-aware interpretable deep learning model for sequence-based prediction of protein-protein interactions
  ☆93Updated 5 months ago
• gitter-lab / nn4dms
  Neural networks for deep mutational scanning data
  ☆67Updated 3 months ago
• tymor22 / tm-vec
  ☆65Updated 4 months ago
• xinyu-dev / annotate_v
  Antibody Annotation - Annotate VH and VL sequences (FR and CDR) in Python
  ☆29Updated last year
• biomed-AI / GraphSite
  GraphSite: protein-DNA binding site prediction using graph transformer and predicted protein structures
  ☆60Updated 6 months ago
• tymor22 / protein-vec
  Repository for Protein-Vec, a protein embedding mixture of experts model
  ☆37Updated last year
• oxpig / CaLM
  Protein language model trained on coding DNA
  ☆46Updated 4 months ago
• YAndrewL / CLAPE
  contrastive learning and pre-trained encoder for protein-ligand binding sites prediction
  ☆26Updated last month
• piercelab / tcrmodel2
  ☆37Updated 4 months ago
• bio-ontology-research-group / deepgo2
  ☆35Updated 5 months ago
• pfnet-research / GenerRNA
  ☆19Updated 4 months ago
• churchlab / low-N-protein-engineering
  Code and data to reproduce analyses in Biswas et al. (2020) "Low-N protein engineering with data-efficient deep learning".
  ☆57Updated 3 years ago
• idrblab / AnnoPRO
  Feature map and function annotation of Proteins
  ☆31Updated 8 months ago
• uci-cbcl / UFold
  ☆62Updated last year
• UniBind / UniBind
  ☆31Updated 2 years ago
• KULL-Centre / _2022_ML-ddG-Blaabjerg
  ☆49Updated 8 months ago
• pylelab / rMSA
  RNA Multiple Sequence Alignment
  ☆32Updated last year
• kWeissenow / EMBER2
  Alignment-free structure prediction using protein language models
  ☆22Updated 2 years ago
• patrickbryant1 / SpeedPPI
  Rapid protein-protein interaction network creation from multiple sequence alignments with Deep Learning
  ☆81Updated 10 months ago
• Devil625 / Codon_Optimization
  https://www.nature.com/articles/s41598-020-74091-z#Tab1
  ☆40Updated 11 months ago
• Shunsuke-1994 / rfamgen
  Code repository of "Deep generative design of RNA family sequences"
  ☆31Updated 7 months ago
• robpearc / DeepFoldRNA
  ☆28Updated last year
• Wang-lab-UCSD / RESP
  The code used to generate the results from Parkinson / Hard et al. 2022
  ☆17Updated 3 months ago
• mana438 / RNABERT
  ☆51Updated last year
• gv20-therapeutics / antibody-in-pytorch
  Machine learning models for antibody sequences in PyTorch
  ☆38Updated 3 years ago
• FPPGroup / CodonBERT
  CodonBert: a BERT-based architecture tailored for codon optimization using the cross-attention mechanism.
  ☆34Updated 5 months ago
• enai4bio / DeepAAI
  DeepAAI
  ☆30Updated last month
• Rostlab / bindPredict
  Prediction of binding residues for metal ions, nucleic acids, and small molecules.
  ☆32Updated 2 months ago
• YihePang / DisoFLAG
  Accurate prediction of protein intrinsic disorder and its functions using graph-based interaction protein language model
  ☆16Updated 6 months ago