sinc-lab / lncRNA-foldingLinks
☆18Updated last year
Alternatives and similar repositories for lncRNA-folding
Users that are interested in lncRNA-folding are comparing it to the libraries listed below
Sorting:
- ☆37Updated 5 months ago
- ☆68Updated 9 months ago
- CodonBert: a BERT-based architecture tailored for codon optimization using the cross-attention mechanism.☆38Updated 9 months ago
- ☆41Updated 3 months ago
- Feature map and function annotation of Proteins☆33Updated last year
- Antibody Annotation - Annotate VH and VL sequences (FR and CDR) in Python☆30Updated 2 years ago
- Struct2GO:protein function prediction based on Graph pooling algorithm and AlphaFold2 structure information☆27Updated last year
- GraphSite: protein-DNA binding site prediction using graph transformer and predicted protein structures☆60Updated 10 months ago
- Predicting immunogenic peptide recognized by TCR through ensemble deep learning☆15Updated last year
- Protein language model trained on coding DNA☆47Updated 8 months ago
- Download pdb/protein structures using Uniprot id; This script will download related PDB files, extract chains(Optional), remove duplicate…☆41Updated 11 months ago
- ☆45Updated 3 years ago
- https://www.nature.com/articles/s41598-020-74091-z#Tab1☆40Updated last year
- A repository for neural representational learning of RNA secondary structures☆32Updated 5 years ago
- ☆49Updated 2 months ago
- Using Transformer protein embeddings with a linear attention mechanism to make SOTA de-novo predictions for the subcellular location of p…☆64Updated last year
- python tools for TCR:peptide-MHC modeling and analysis☆79Updated last year
- Rapid protein-protein interaction network creation from multiple sequence alignments with Deep Learning☆88Updated last year
- ☆33Updated 2 years ago
- Machine learning models for antibody sequences in PyTorch☆39Updated 4 years ago
- contrastive learning and pre-trained encoder for protein-ligand binding sites prediction☆30Updated 5 months ago
- A structure-aware interpretable deep learning model for sequence-based prediction of protein-protein interactions☆101Updated 9 months ago
- NetSurfP 3.0: Protein secondary structure and relative solvent accessibility prediction☆20Updated 2 years ago
- Geometric deep learning of protein–DNA binding specificity☆74Updated 3 months ago
- Accurate prediction of protein intrinsic disorder and its functions using graph-based interaction protein language model☆21Updated 10 months ago
- Neural networks for deep mutational scanning data☆69Updated 3 weeks ago
- ☆19Updated 8 months ago
- ☆30Updated last year
- Geometry-aware protein binding site predictor☆21Updated 9 months ago
- Prediction of binding residues for metal ions, nucleic acids, and small molecules.☆32Updated 6 months ago