ntranoslab / esm-variants
☆71Updated last year
Alternatives and similar repositories for esm-variants:
Users that are interested in esm-variants are comparing it to the libraries listed below
- python tools for TCR:peptide-MHC modeling and analysis☆71Updated 11 months ago
- Multi-class signal peptide prediction and structure decoding model.☆83Updated last month
- BigMHC predicts MHC-I (neo)epitope presentation and immunogenicity☆50Updated 10 months ago
- ScanFold is an RNA sequence scanning pipeline which attempts to identify potentially functional RNA secondary structures. This is done by…☆17Updated 2 years ago
- Feature map and function annotation of Proteins☆32Updated 9 months ago
- RNA structure probing and post-transcriptional modifications mapping high-throughput data analysis☆37Updated last week
- An error model and pipeline for analyzing deep mutational scanning (DMS) data and diagnosing common experimental pathologies☆30Updated last week
- Evolutionary velocity with protein language models☆88Updated last year
- ☆77Updated 5 months ago
- Genomic language model predicts protein co-regulation and function☆72Updated last year
- Official repository for the paper "Large-scale clinical interpretation of genetic variants using evolutionary data and deep learning". Jo…☆167Updated 11 months ago
- Nature Biotechnology: Ultra-fast, sensitive detection of protein remote homologs using deep dense retrieval☆101Updated 6 months ago
- Protein 3D structure prediction pipeline☆71Updated 2 weeks ago
- Mutation effects predicted from sequence co-variation☆63Updated 7 years ago
- Improving RNA structure prediction through multitask learning on diverse crowdsourced data.☆55Updated 7 months ago
- HLA-II ligand predictor.☆41Updated last year
- Draw RNA secondary structures in python.☆47Updated 6 months ago
- Visualise RNA secondary structure in consistent, reproducible and recognisable layouts☆71Updated last week
- ☆65Updated 5 months ago
- ☆31Updated 2 weeks ago
- ☆65Updated 2 weeks ago
- Computational Optimization of DNA Activity (CODA)☆56Updated 2 months ago
- Detailed explanation on how to setup database for NCBI IgBlast executable, and using it in Python☆28Updated 2 years ago
- Geometric deep learning of protein–DNA binding specificity☆62Updated last week
- Modeling of human 5′ UTRs enables the design of new sequences for target levels of translation and 5′ UTR variant prediction.☆44Updated 5 years ago
- Large language modeling applied to T-cell receptor (TCR) sequences.☆50Updated 2 years ago
- Collection of papers related to BCR repertoire analyses☆18Updated 3 years ago
- Comprehensive Python client for the Uniprot REST API☆46Updated 6 months ago
- Deep-learning empowered prediction and generation of immunogenic epitopes for T cell immunity☆65Updated last year
- Rapid protein-protein interaction network creation from multiple sequence alignments with Deep Learning☆81Updated 11 months ago